Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATF1P18846 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.77■□□□□ 0.12
ATF1P18846 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATF1P18846 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATF1P18846 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.77■□□□□ 0.12
ATF1P18846 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ATF1P18846 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.77■□□□□ 0.12
ATF1P18846 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.77■□□□□ 0.12
ATF1P18846 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
ATF1P18846 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
ATF1P18846 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.77■□□□□ 0.12
ATF1P18846 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATF1P18846 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATF1P18846 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATF1P18846 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATF1P18846 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.77■□□□□ 0.12
ATF1P18846 KRT18P23-201ENST00000435622 1283 ntBASIC15.77■□□□□ 0.12
ATF1P18846 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.77■□□□□ 0.12
ATF1P18846 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.77■□□□□ 0.12
ATF1P18846 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATF1P18846 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATF1P18846 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.77■□□□□ 0.11
ATF1P18846 AL138688.1-201ENST00000624851 1594 ntBASIC15.77■□□□□ 0.11
ATF1P18846 AC018695.7-201ENST00000624587 2492 ntBASIC15.77■□□□□ 0.11
ATF1P18846 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
ATF1P18846 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.77■□□□□ 0.11
ATF1P18846 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATF1P18846 KRT8P7-201ENST00000533003 1432 ntBASIC15.77■□□□□ 0.11
ATF1P18846 HOXB1-202ENST00000577092 1414 ntBASIC15.77■□□□□ 0.11
ATF1P18846 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
ATF1P18846 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.76■□□□□ 0.11
ATF1P18846 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.76■□□□□ 0.11
ATF1P18846 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.76■□□□□ 0.11
ATF1P18846 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ATF1P18846 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.76■□□□□ 0.11
ATF1P18846 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.76■□□□□ 0.11
ATF1P18846 TSPY17P-201ENST00000450329 467 ntBASIC15.76■□□□□ 0.11
ATF1P18846 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.76■□□□□ 0.11
ATF1P18846 AP003071.4-201ENST00000562276 1284 ntBASIC15.76■□□□□ 0.11
ATF1P18846 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.76■□□□□ 0.11
ATF1P18846 AL353719.1-201ENST00000566847 864 ntBASIC15.76■□□□□ 0.11
ATF1P18846 Z99916.2-201ENST00000604037 246 ntBASIC15.76■□□□□ 0.11
ATF1P18846 AL023803.3-201ENST00000615559 522 ntBASIC15.76■□□□□ 0.11
ATF1P18846 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ATF1P18846 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
ATF1P18846 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
ATF1P18846 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.76■□□□□ 0.11
ATF1P18846 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.76■□□□□ 0.11
ATF1P18846 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.76■□□□□ 0.11
ATF1P18846 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATF1P18846 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.75■□□□□ 0.11
ATF1P18846 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATF1P18846 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ATF1P18846 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATF1P18846 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATF1P18846 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ATF1P18846 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATF1P18846 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATF1P18846 UNC93B2-201ENST00000285383 730 ntBASIC15.75■□□□□ 0.11
ATF1P18846 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.75■□□□□ 0.11
ATF1P18846 SLC25A1P2-201ENST00000430693 912 ntBASIC15.75■□□□□ 0.11
ATF1P18846 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.75■□□□□ 0.11
ATF1P18846 AP003041.3-201ENST00000527151 707 ntBASIC15.75■□□□□ 0.11
ATF1P18846 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATF1P18846 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.75■□□□□ 0.11
ATF1P18846 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ATF1P18846 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATF1P18846 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATF1P18846 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.75■□□□□ 0.11
ATF1P18846 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATF1P18846 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATF1P18846 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATF1P18846 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATF1P18846 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.75■□□□□ 0.11
ATF1P18846 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.74■□□□□ 0.11
ATF1P18846 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.74■□□□□ 0.11
ATF1P18846 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.74■□□□□ 0.11
ATF1P18846 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.74■□□□□ 0.11
ATF1P18846 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.74■□□□□ 0.11
ATF1P18846 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATF1P18846 AC133963.1-201ENST00000504166 1679 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms