Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALM3P0DP25 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALM3P0DP25 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.83■□□□□ 0.93
CALM3P0DP25 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALM3P0DP25 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CALM3P0DP25 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALM3P0DP25 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CALM3P0DP25 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALM3P0DP25 AC096633.1-201ENST00000422446 749 ntBASIC20.83■□□□□ 0.93
CALM3P0DP25 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CALM3P0DP25 DDX43P3-201ENST00000441064 443 ntBASIC20.83■□□□□ 0.93
CALM3P0DP25 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.83■□□□□ 0.93
CALM3P0DP25 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CALM3P0DP25 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.83■□□□□ 0.93
CALM3P0DP25 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CALM3P0DP25 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.83■□□□□ 0.93
CALM3P0DP25 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.83■□□□□ 0.93
CALM3P0DP25 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.83■□□□□ 0.93
CALM3P0DP25 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CALM3P0DP25 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
CALM3P0DP25 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.83■□□□□ 0.92
CALM3P0DP25 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CALM3P0DP25 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CALM3P0DP25 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CALM3P0DP25 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.83■□□□□ 0.92
CALM3P0DP25 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CALM3P0DP25 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CALM3P0DP25 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 AC008764.6-201ENST00000595909 2069 ntBASIC20.82■□□□□ 0.92
CALM3P0DP25 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CALM3P0DP25 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.82■□□□□ 0.92
CALM3P0DP25 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.82■□□□□ 0.92
CALM3P0DP25 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.82■□□□□ 0.92
CALM3P0DP25 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.82■□□□□ 0.92
CALM3P0DP25 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CALM3P0DP25 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CALM3P0DP25 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.82■□□□□ 0.92
CALM3P0DP25 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALM3P0DP25 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CALM3P0DP25 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.81■□□□□ 0.92
CALM3P0DP25 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CALM3P0DP25 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CALM3P0DP25 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.81■□□□□ 0.92
CALM3P0DP25 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALM3P0DP25 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.81■□□□□ 0.92
CALM3P0DP25 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.81■□□□□ 0.92
CALM3P0DP25 AC125634.1-201ENST00000438758 1403 ntBASIC20.81■□□□□ 0.92
CALM3P0DP25 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CALM3P0DP25 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CALM3P0DP25 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALM3P0DP25 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALM3P0DP25 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CALM3P0DP25 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CALM3P0DP25 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.81■□□□□ 0.92
CALM3P0DP25 AC005336.2-201ENST00000593183 939 ntBASIC20.81■□□□□ 0.92
CALM3P0DP25 AL138831.2-201ENST00000606564 490 ntBASIC20.81■□□□□ 0.92
CALM3P0DP25 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.81■□□□□ 0.92
CALM3P0DP25 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.81■□□□□ 0.92
CALM3P0DP25 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALM3P0DP25 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.81■□□□□ 0.92
CALM3P0DP25 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CALM3P0DP25 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CALM3P0DP25 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALM3P0DP25 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CALM3P0DP25 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.8■□□□□ 0.92
CALM3P0DP25 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CALM3P0DP25 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CALM3P0DP25 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CALM3P0DP25 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALM3P0DP25 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CALM3P0DP25 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.8■□□□□ 0.92
CALM3P0DP25 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALM3P0DP25 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CALM3P0DP25 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.8■□□□□ 0.92
CALM3P0DP25 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.8■□□□□ 0.92
CALM3P0DP25 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALM3P0DP25 KRT17P6-201ENST00000453795 1220 ntBASIC20.8■□□□□ 0.92
CALM3P0DP25 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.8■□□□□ 0.92
CALM3P0DP25 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALM3P0DP25 AC012615.1-201ENST00000565797 1299 ntBASIC20.8■□□□□ 0.92
CALM3P0DP25 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.8■□□□□ 0.92
CALM3P0DP25 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.8■□□□□ 0.92
CALM3P0DP25 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.8■□□□□ 0.92
CALM3P0DP25 AP005901.3-202ENST00000581653 237 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms