Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.76■□□□□ 0.11
UBCP0CG48 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.76■□□□□ 0.11
UBCP0CG48 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
UBCP0CG48 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.76■□□□□ 0.11
UBCP0CG48 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 AP000525.1-201ENST00000608286 694 ntBASIC15.76■□□□□ 0.11
UBCP0CG48 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
UBCP0CG48 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.76■□□□□ 0.11
UBCP0CG48 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
UBCP0CG48 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
UBCP0CG48 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
UBCP0CG48 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.76■□□□□ 0.11
UBCP0CG48 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
UBCP0CG48 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.76■□□□□ 0.11
UBCP0CG48 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.76■□□□□ 0.11
UBCP0CG48 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
UBCP0CG48 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
UBCP0CG48 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
UBCP0CG48 AC022898.2-201ENST00000616822 1312 ntBASIC15.75■□□□□ 0.11
UBCP0CG48 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.75■□□□□ 0.11
UBCP0CG48 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.75■□□□□ 0.11
UBCP0CG48 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.75■□□□□ 0.11
UBCP0CG48 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.75■□□□□ 0.11
UBCP0CG48 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 Z99916.2-201ENST00000604037 246 ntBASIC15.75■□□□□ 0.11
UBCP0CG48 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.75■□□□□ 0.11
UBCP0CG48 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.75■□□□□ 0.11
UBCP0CG48 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
UBCP0CG48 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
UBCP0CG48 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
UBCP0CG48 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
UBCP0CG48 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
UBCP0CG48 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
UBCP0CG48 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBCP0CG48 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
UBCP0CG48 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
UBCP0CG48 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.74■□□□□ 0.11
UBCP0CG48 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
UBCP0CG48 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
UBCP0CG48 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
UBCP0CG48 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
UBCP0CG48 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.74■□□□□ 0.11
UBCP0CG48 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.74■□□□□ 0.11
UBCP0CG48 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
UBCP0CG48 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.74■□□□□ 0.11
UBCP0CG48 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.74■□□□□ 0.11
UBCP0CG48 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.74■□□□□ 0.11
UBCP0CG48 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.74■□□□□ 0.11
UBCP0CG48 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.74■□□□□ 0.11
UBCP0CG48 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.74■□□□□ 0.11
UBCP0CG48 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.74■□□□□ 0.11
UBCP0CG48 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.74■□□□□ 0.11
UBCP0CG48 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.74■□□□□ 0.11
UBCP0CG48 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBCP0CG48 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms