Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.28■□□□□ 0.2
FREM3P0C091 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.28■□□□□ 0.2
FREM3P0C091 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.28■□□□□ 0.2
FREM3P0C091 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.28■□□□□ 0.2
FREM3P0C091 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.28■□□□□ 0.2
FREM3P0C091 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.28■□□□□ 0.2
FREM3P0C091 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
FREM3P0C091 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.28■□□□□ 0.2
FREM3P0C091 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.28■□□□□ 0.2
FREM3P0C091 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
FREM3P0C091 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.28■□□□□ 0.2
FREM3P0C091 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
FREM3P0C091 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.28■□□□□ 0.2
FREM3P0C091 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.28■□□□□ 0.2
FREM3P0C091 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FREM3P0C091 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
FREM3P0C091 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
FREM3P0C091 RN7SL606P-201ENST00000472779 293 ntBASIC16.28■□□□□ 0.2
FREM3P0C091 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.28■□□□□ 0.2
FREM3P0C091 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
FREM3P0C091 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.28■□□□□ 0.2
FREM3P0C091 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
FREM3P0C091 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.28■□□□□ 0.2
FREM3P0C091 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
FREM3P0C091 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FREM3P0C091 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FREM3P0C091 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FREM3P0C091 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.27■□□□□ 0.2
FREM3P0C091 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FREM3P0C091 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FREM3P0C091 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FREM3P0C091 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FREM3P0C091 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.27■□□□□ 0.2
FREM3P0C091 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.27■□□□□ 0.2
FREM3P0C091 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.27■□□□□ 0.2
FREM3P0C091 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
FREM3P0C091 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FREM3P0C091 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FREM3P0C091 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.27■□□□□ 0.19
FREM3P0C091 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
FREM3P0C091 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
FREM3P0C091 LETM1P2-201ENST00000597330 2178 ntBASIC16.27■□□□□ 0.19
FREM3P0C091 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.27■□□□□ 0.19
FREM3P0C091 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.27■□□□□ 0.19
FREM3P0C091 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
FREM3P0C091 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FREM3P0C091 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FREM3P0C091 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FREM3P0C091 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FREM3P0C091 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
FREM3P0C091 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
FREM3P0C091 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.27■□□□□ 0.19
FREM3P0C091 AL031008.1-201ENST00000619963 541 ntBASIC16.27■□□□□ 0.19
FREM3P0C091 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
FREM3P0C091 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FREM3P0C091 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
FREM3P0C091 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.26■□□□□ 0.19
FREM3P0C091 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 LINC00602-201ENST00000629776 2065 ntBASIC16.26■□□□□ 0.19
FREM3P0C091 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
FREM3P0C091 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.26■□□□□ 0.19
FREM3P0C091 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
FREM3P0C091 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.26■□□□□ 0.19
FREM3P0C091 KRT16P4-201ENST00000453883 522 ntBASIC16.26■□□□□ 0.19
FREM3P0C091 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.26■□□□□ 0.19
FREM3P0C091 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.26■□□□□ 0.19
FREM3P0C091 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
FREM3P0C091 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
FREM3P0C091 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FREM3P0C091 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 AC010460.3-201ENST00000511359 1579 ntBASIC16.26■□□□□ 0.19
FREM3P0C091 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FREM3P0C091 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms