Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOBP04114 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC11.1□□□□□ -0.63
APOBP04114 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOBP04114 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC11.1□□□□□ -0.63
APOBP04114 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOBP04114 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
APOBP04114 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
APOBP04114 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC11.1□□□□□ -0.63
APOBP04114 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC11.1□□□□□ -0.63
APOBP04114 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
APOBP04114 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOBP04114 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.1□□□□□ -0.63
APOBP04114 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
APOBP04114 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.1□□□□□ -0.63
APOBP04114 AC004449.1-201ENST00000564240 433 ntBASIC11.1□□□□□ -0.63
APOBP04114 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOBP04114 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOBP04114 AC100803.2-201ENST00000562459 1963 ntBASIC11.1□□□□□ -0.63
APOBP04114 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOBP04114 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
APOBP04114 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOBP04114 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
APOBP04114 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOBP04114 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.1□□□□□ -0.63
APOBP04114 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.1□□□□□ -0.63
APOBP04114 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
APOBP04114 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.1□□□□□ -0.63
APOBP04114 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC11.1□□□□□ -0.63
APOBP04114 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.1□□□□□ -0.63
APOBP04114 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOBP04114 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOBP04114 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOBP04114 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC11.09□□□□□ -0.63
APOBP04114 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.09□□□□□ -0.63
APOBP04114 REXO1L3P-201ENST00000622202 1288 ntBASIC11.09□□□□□ -0.63
APOBP04114 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC11.09□□□□□ -0.63
APOBP04114 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
APOBP04114 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
APOBP04114 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.09□□□□□ -0.63
APOBP04114 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.09□□□□□ -0.63
APOBP04114 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.09□□□□□ -0.63
APOBP04114 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.09□□□□□ -0.63
APOBP04114 AL353135.1-201ENST00000606729 504 ntBASIC11.09□□□□□ -0.63
APOBP04114 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC11.09□□□□□ -0.63
APOBP04114 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.09□□□□□ -0.63
APOBP04114 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.09□□□□□ -0.63
APOBP04114 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC11.09□□□□□ -0.63
APOBP04114 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
APOBP04114 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
APOBP04114 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 NOP2-220ENST00000545915 630 ntTSL 2 BASIC11.09□□□□□ -0.63
APOBP04114 AL512356.2-201ENST00000546955 174 ntBASIC11.09□□□□□ -0.63
APOBP04114 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.09□□□□□ -0.63
APOBP04114 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC11.09□□□□□ -0.63
APOBP04114 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 AL161938.1-201ENST00000569833 2180 ntBASIC11.09□□□□□ -0.63
APOBP04114 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
APOBP04114 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOBP04114 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC11.09□□□□□ -0.63
APOBP04114 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC11.09□□□□□ -0.63
APOBP04114 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.09□□□□□ -0.63
APOBP04114 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
APOBP04114 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.09□□□□□ -0.63
APOBP04114 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC11.09□□□□□ -0.63
APOBP04114 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
APOBP04114 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC11.08□□□□□ -0.63
APOBP04114 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 FO538757.1-201ENST00000623083 1397 ntBASIC11.08□□□□□ -0.64
APOBP04114 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.08□□□□□ -0.64
APOBP04114 AC074386.1-202ENST00000463561 864 ntBASIC11.08□□□□□ -0.64
APOBP04114 INGX-202ENST00000489074 768 ntBASIC11.08□□□□□ -0.64
APOBP04114 SERBP1P5-201ENST00000510079 1181 ntBASIC11.08□□□□□ -0.64
APOBP04114 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.08□□□□□ -0.64
APOBP04114 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.08□□□□□ -0.64
APOBP04114 TMED1-207ENST00000591695 809 ntTSL 5 BASIC11.08□□□□□ -0.64
APOBP04114 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.08□□□□□ -0.64
APOBP04114 AC009093.7-201ENST00000623853 1223 ntBASIC11.08□□□□□ -0.64
APOBP04114 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC11.08□□□□□ -0.64
APOBP04114 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 CLDN5-201ENST00000403084 2357 ntBASIC11.08□□□□□ -0.64
APOBP04114 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC11.08□□□□□ -0.64
APOBP04114 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
APOBP04114 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms