Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN1O95832 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN1O95832 AL035633.1-201ENST00000406139 838 ntBASIC16.02■□□□□ 0.16
CLDN1O95832 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN1O95832 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN1O95832 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CLDN1O95832 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN1O95832 AC005336.2-201ENST00000593183 939 ntBASIC16.02■□□□□ 0.16
CLDN1O95832 AC239800.4-201ENST00000603712 296 ntBASIC16.02■□□□□ 0.16
CLDN1O95832 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN1O95832 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN1O95832 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN1O95832 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.02■□□□□ 0.15
CLDN1O95832 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CLDN1O95832 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN1O95832 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN1O95832 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN1O95832 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN1O95832 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN1O95832 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CLDN1O95832 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN1O95832 AC034236.2-201ENST00000606662 1610 ntBASIC16.01■□□□□ 0.15
CLDN1O95832 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN1O95832 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN1O95832 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN1O95832 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN1O95832 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLDN1O95832 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN1O95832 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN1O95832 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN1O95832 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN1O95832 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLDN1O95832 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN1O95832 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.01■□□□□ 0.15
CLDN1O95832 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN1O95832 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN1O95832 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16■□□□□ 0.15
CLDN1O95832 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16■□□□□ 0.15
CLDN1O95832 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CLDN1O95832 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16■□□□□ 0.15
CLDN1O95832 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CLDN1O95832 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CLDN1O95832 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16■□□□□ 0.15
CLDN1O95832 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLDN1O95832 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
CLDN1O95832 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16■□□□□ 0.15
CLDN1O95832 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16■□□□□ 0.15
CLDN1O95832 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16■□□□□ 0.15
CLDN1O95832 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16■□□□□ 0.15
CLDN1O95832 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16■□□□□ 0.15
CLDN1O95832 UNC93B6-202ENST00000528242 690 ntBASIC16■□□□□ 0.15
CLDN1O95832 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16■□□□□ 0.15
CLDN1O95832 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16■□□□□ 0.15
CLDN1O95832 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16■□□□□ 0.15
CLDN1O95832 MTDHP5-201ENST00000598980 586 ntBASIC16■□□□□ 0.15
CLDN1O95832 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16■□□□□ 0.15
CLDN1O95832 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
CLDN1O95832 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16■□□□□ 0.15
CLDN1O95832 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN1O95832 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms