Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.04■□□□□ -0
ABCA1O95477 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.04■□□□□ -0
ABCA1O95477 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ABCA1O95477 ZNF259P1-201ENST00000407656 1365 ntBASIC15.03■□□□□ -0
ABCA1O95477 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
ABCA1O95477 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.03■□□□□ -0
ABCA1O95477 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.03■□□□□ -0
ABCA1O95477 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ABCA1O95477 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.03■□□□□ -0
ABCA1O95477 AC113404.2-201ENST00000507884 177 ntBASIC15.03■□□□□ -0
ABCA1O95477 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.03■□□□□ -0
ABCA1O95477 MTDHP3-201ENST00000594186 672 ntBASIC15.03■□□□□ -0
ABCA1O95477 LINC02084-201ENST00000606069 1096 ntBASIC15.03■□□□□ -0
ABCA1O95477 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
ABCA1O95477 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.03■□□□□ -0
ABCA1O95477 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.03■□□□□ -0
ABCA1O95477 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ABCA1O95477 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 AC018445.3-201ENST00000624177 1945 ntBASIC15.03■□□□□ -0
ABCA1O95477 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.03■□□□□ -0
ABCA1O95477 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.03■□□□□ -0
ABCA1O95477 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.03■□□□□ -0
ABCA1O95477 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.03■□□□□ -0
ABCA1O95477 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.03■□□□□ -0
ABCA1O95477 AP001269.4-201ENST00000609611 512 ntBASIC15.03■□□□□ -0
ABCA1O95477 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
ABCA1O95477 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.02■□□□□ -0
ABCA1O95477 FEM1AP3-201ENST00000403722 1741 ntBASIC15.02■□□□□ -0
ABCA1O95477 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ABCA1O95477 AC141586.3-201ENST00000562166 1838 ntBASIC15.02■□□□□ -0
ABCA1O95477 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.02■□□□□ -0
ABCA1O95477 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ABCA1O95477 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.02■□□□□ -0
ABCA1O95477 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.02■□□□□ -0
ABCA1O95477 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ABCA1O95477 MTMR9LP-203ENST00000426597 1545 ntBASIC15.02■□□□□ -0
ABCA1O95477 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ABCA1O95477 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.02■□□□□ -0
ABCA1O95477 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
ABCA1O95477 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
ABCA1O95477 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.02□□□□□ -0.01
ABCA1O95477 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.02□□□□□ -0.01
ABCA1O95477 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ABCA1O95477 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.02□□□□□ -0.01
ABCA1O95477 AC116407.3-201ENST00000623905 1129 ntBASIC15.02□□□□□ -0.01
ABCA1O95477 AL133373.2-201ENST00000623187 2828 ntBASIC15.02□□□□□ -0.01
ABCA1O95477 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.02□□□□□ -0.01
ABCA1O95477 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ABCA1O95477 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.02□□□□□ -0.01
ABCA1O95477 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ABCA1O95477 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.02□□□□□ -0.01
ABCA1O95477 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ABCA1O95477 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ABCA1O95477 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.01□□□□□ -0.01
ABCA1O95477 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ABCA1O95477 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.01□□□□□ -0.01
ABCA1O95477 AC027796.2-201ENST00000575326 344 ntBASIC15.01□□□□□ -0.01
ABCA1O95477 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.01□□□□□ -0.01
ABCA1O95477 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.01□□□□□ -0.01
ABCA1O95477 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 AC104109.2-201ENST00000602919 1418 ntBASIC15.01□□□□□ -0.01
ABCA1O95477 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
ABCA1O95477 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.01□□□□□ -0.01
ABCA1O95477 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.01□□□□□ -0.01
ABCA1O95477 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms