Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LTN1O94822 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LTN1O94822 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC23.61■■□□□ 1.37
LTN1O94822 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC23.61■■□□□ 1.37
LTN1O94822 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LTN1O94822 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LTN1O94822 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC23.61■■□□□ 1.37
LTN1O94822 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC23.61■■□□□ 1.37
LTN1O94822 POLD4-207ENST00000531239 584 ntTSL 2 BASIC23.61■■□□□ 1.37
LTN1O94822 AL078644.1-201ENST00000609881 752 ntBASIC23.61■■□□□ 1.37
LTN1O94822 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC23.61■■□□□ 1.37
LTN1O94822 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC23.61■■□□□ 1.37
LTN1O94822 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LTN1O94822 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LTN1O94822 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
LTN1O94822 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.61■■□□□ 1.37
LTN1O94822 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC23.61■■□□□ 1.37
LTN1O94822 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LTN1O94822 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
LTN1O94822 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23.61■■□□□ 1.37
LTN1O94822 AC254562.1-201ENST00000417586 456 ntBASIC23.6■■□□□ 1.37
LTN1O94822 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC23.6■■□□□ 1.37
LTN1O94822 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC23.6■■□□□ 1.37
LTN1O94822 STK19B-204ENST00000512515 211 ntBASIC23.6■■□□□ 1.37
LTN1O94822 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC23.6■■□□□ 1.37
LTN1O94822 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC23.6■■□□□ 1.37
LTN1O94822 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
LTN1O94822 AC009336.1-201ENST00000608941 1553 ntBASIC23.6■■□□□ 1.37
LTN1O94822 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
LTN1O94822 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
LTN1O94822 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LTN1O94822 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
LTN1O94822 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
LTN1O94822 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
LTN1O94822 MRPL20P1-201ENST00000400819 433 ntBASIC23.6■■□□□ 1.37
LTN1O94822 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC23.6■■□□□ 1.37
LTN1O94822 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC23.6■■□□□ 1.37
LTN1O94822 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LTN1O94822 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
LTN1O94822 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LTN1O94822 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LTN1O94822 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.59■■□□□ 1.37
LTN1O94822 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.59■■□□□ 1.37
LTN1O94822 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.59■■□□□ 1.37
LTN1O94822 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC23.59■■□□□ 1.37
LTN1O94822 SLC4A1APP2-201ENST00000424054 1259 ntBASIC23.59■■□□□ 1.37
LTN1O94822 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC23.59■■□□□ 1.37
LTN1O94822 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC23.59■■□□□ 1.37
LTN1O94822 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC23.59■■□□□ 1.37
LTN1O94822 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LTN1O94822 GPR89P-201ENST00000407924 1495 ntBASIC23.59■■□□□ 1.37
LTN1O94822 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LTN1O94822 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
LTN1O94822 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LTN1O94822 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC23.59■■□□□ 1.37
LTN1O94822 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.59■■□□□ 1.37
LTN1O94822 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC23.58■■□□□ 1.37
LTN1O94822 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LTN1O94822 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LTN1O94822 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LTN1O94822 ADH5P3-201ENST00000433842 1137 ntBASIC23.58■■□□□ 1.37
LTN1O94822 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC23.58■■□□□ 1.37
LTN1O94822 PUS1-205ENST00000535067 838 ntTSL 3 BASIC23.58■■□□□ 1.37
LTN1O94822 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC23.58■■□□□ 1.37
LTN1O94822 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC23.58■■□□□ 1.37
LTN1O94822 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC23.58■■□□□ 1.37
LTN1O94822 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LTN1O94822 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LTN1O94822 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
LTN1O94822 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LTN1O94822 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
LTN1O94822 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.58■■□□□ 1.36
LTN1O94822 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
LTN1O94822 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.58■■□□□ 1.36
LTN1O94822 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.58■■□□□ 1.36
LTN1O94822 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
LTN1O94822 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LTN1O94822 ACTG1P4-201ENST00000425123 1122 ntBASIC23.57■■□□□ 1.36
LTN1O94822 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC23.57■■□□□ 1.36
LTN1O94822 PDPK2P-202ENST00000562415 1191 ntBASIC23.57■■□□□ 1.36
LTN1O94822 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
LTN1O94822 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC23.57■■□□□ 1.36
LTN1O94822 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC23.57■■□□□ 1.36
LTN1O94822 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.57■■□□□ 1.36
LTN1O94822 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LTN1O94822 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC23.57■■□□□ 1.36
LTN1O94822 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LTN1O94822 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LTN1O94822 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
LTN1O94822 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.57■■□□□ 1.36
LTN1O94822 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.57■■□□□ 1.36
LTN1O94822 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LTN1O94822 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC23.57■■□□□ 1.36
LTN1O94822 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC23.57■■□□□ 1.36
LTN1O94822 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC23.57■■□□□ 1.36
LTN1O94822 SLC25A24-204ENST00000569674 2357 ntBASIC23.57■■□□□ 1.36
LTN1O94822 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
LTN1O94822 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC23.56■■□□□ 1.36
LTN1O94822 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.56■■□□□ 1.36
LTN1O94822 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms