Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.01■□□□□ 0.47
RFPL1O75677 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.01■□□□□ 0.47
RFPL1O75677 COX11P1-201ENST00000489116 835 ntBASIC18.01■□□□□ 0.47
RFPL1O75677 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.01■□□□□ 0.47
RFPL1O75677 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFPL1O75677 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.01■□□□□ 0.47
RFPL1O75677 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFPL1O75677 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.01■□□□□ 0.47
RFPL1O75677 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.01■□□□□ 0.47
RFPL1O75677 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.01■□□□□ 0.47
RFPL1O75677 AL138966.2-201ENST00000621997 464 ntBASIC18.01■□□□□ 0.47
RFPL1O75677 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.01■□□□□ 0.47
RFPL1O75677 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.01■□□□□ 0.47
RFPL1O75677 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFPL1O75677 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.01■□□□□ 0.47
RFPL1O75677 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFPL1O75677 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFPL1O75677 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFPL1O75677 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFPL1O75677 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFPL1O75677 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.01■□□□□ 0.47
RFPL1O75677 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18■□□□□ 0.47
RFPL1O75677 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 AD000864.1-201ENST00000624076 2295 ntBASIC18■□□□□ 0.47
RFPL1O75677 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18■□□□□ 0.47
RFPL1O75677 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RFPL1O75677 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18■□□□□ 0.47
RFPL1O75677 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18■□□□□ 0.47
RFPL1O75677 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18■□□□□ 0.47
RFPL1O75677 TSPY17P-201ENST00000450329 467 ntBASIC18■□□□□ 0.47
RFPL1O75677 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18■□□□□ 0.47
RFPL1O75677 YBX1P2-201ENST00000489612 999 ntBASIC18■□□□□ 0.47
RFPL1O75677 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18■□□□□ 0.47
RFPL1O75677 AC009065.1-201ENST00000564055 1225 ntBASIC18■□□□□ 0.47
RFPL1O75677 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18■□□□□ 0.47
RFPL1O75677 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18■□□□□ 0.47
RFPL1O75677 AC112497.1-201ENST00000624824 639 ntBASIC18■□□□□ 0.47
RFPL1O75677 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18■□□□□ 0.47
RFPL1O75677 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RFPL1O75677 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RFPL1O75677 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
RFPL1O75677 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFPL1O75677 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RFPL1O75677 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RFPL1O75677 AC133963.1-201ENST00000504166 1679 ntBASIC17.99■□□□□ 0.47
RFPL1O75677 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RFPL1O75677 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.99■□□□□ 0.47
RFPL1O75677 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 AC092338.2-201ENST00000568827 1415 ntBASIC17.99■□□□□ 0.47
RFPL1O75677 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.99■□□□□ 0.47
RFPL1O75677 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.99■□□□□ 0.47
RFPL1O75677 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.99■□□□□ 0.47
RFPL1O75677 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
RFPL1O75677 TSPY5P-201ENST00000426936 936 ntBASIC17.99■□□□□ 0.47
RFPL1O75677 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RFPL1O75677 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.99■□□□□ 0.47
RFPL1O75677 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.99■□□□□ 0.47
RFPL1O75677 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.99■□□□□ 0.47
RFPL1O75677 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
RFPL1O75677 AL512604.3-201ENST00000569583 964 ntBASIC17.99■□□□□ 0.47
RFPL1O75677 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.99■□□□□ 0.47
RFPL1O75677 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.99■□□□□ 0.47
RFPL1O75677 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.99■□□□□ 0.47
RFPL1O75677 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
RFPL1O75677 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 AL138688.1-201ENST00000624851 1594 ntBASIC17.99■□□□□ 0.47
RFPL1O75677 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFPL1O75677 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RFPL1O75677 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RFPL1O75677 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms