Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF40O75150 LINC01311-201ENST00000565162 1445 ntBASIC19.39■□□□□ 0.69
RNF40O75150 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF40O75150 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF40O75150 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF40O75150 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF40O75150 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RNF40O75150 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF40O75150 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF40O75150 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
RNF40O75150 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
RNF40O75150 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF40O75150 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF40O75150 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.39■□□□□ 0.69
RNF40O75150 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RNF40O75150 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF40O75150 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF40O75150 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF40O75150 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF40O75150 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF40O75150 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF40O75150 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF40O75150 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RNF40O75150 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RNF40O75150 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF40O75150 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF40O75150 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
RNF40O75150 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF40O75150 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF40O75150 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF40O75150 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF40O75150 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RNF40O75150 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RNF40O75150 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF40O75150 AC108860.2-201ENST00000562760 2183 ntBASIC19.38■□□□□ 0.69
RNF40O75150 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RNF40O75150 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF40O75150 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF40O75150 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.38■□□□□ 0.69
RNF40O75150 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF40O75150 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.38■□□□□ 0.69
RNF40O75150 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF40O75150 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF40O75150 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF40O75150 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF40O75150 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF40O75150 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF40O75150 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF40O75150 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RNF40O75150 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RNF40O75150 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
RNF40O75150 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RNF40O75150 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF40O75150 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF40O75150 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF40O75150 AD000864.1-201ENST00000624076 2295 ntBASIC19.37■□□□□ 0.69
RNF40O75150 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF40O75150 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
RNF40O75150 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RNF40O75150 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF40O75150 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF40O75150 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF40O75150 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF40O75150 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF40O75150 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF40O75150 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF40O75150 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF40O75150 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF40O75150 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF40O75150 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF40O75150 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF40O75150 SLC25A6P5-201ENST00000435663 894 ntBASIC19.36■□□□□ 0.69
RNF40O75150 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.36■□□□□ 0.69
RNF40O75150 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF40O75150 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF40O75150 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF40O75150 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF40O75150 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF40O75150 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF40O75150 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF40O75150 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RNF40O75150 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF40O75150 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms