Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.31■□□□□ 0.36
GFRA3O60609 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.31■□□□□ 0.36
GFRA3O60609 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.31■□□□□ 0.36
GFRA3O60609 FAM8A2P-201ENST00000528813 1142 ntBASIC17.31■□□□□ 0.36
GFRA3O60609 MIR4525-201ENST00000580000 75 ntBASIC17.31■□□□□ 0.36
GFRA3O60609 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.31■□□□□ 0.36
GFRA3O60609 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.31■□□□□ 0.36
GFRA3O60609 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.31■□□□□ 0.36
GFRA3O60609 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.31■□□□□ 0.36
GFRA3O60609 AC020907.5-201ENST00000624372 1936 ntBASIC17.31■□□□□ 0.36
GFRA3O60609 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GFRA3O60609 AL024508.2-201ENST00000607749 1894 ntBASIC17.31■□□□□ 0.36
GFRA3O60609 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GFRA3O60609 FEM1AP3-201ENST00000403722 1741 ntBASIC17.3■□□□□ 0.36
GFRA3O60609 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.3■□□□□ 0.36
GFRA3O60609 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFRA3O60609 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFRA3O60609 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GFRA3O60609 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GFRA3O60609 AC002056.1-201ENST00000395613 760 ntBASIC17.3■□□□□ 0.36
GFRA3O60609 AL355306.1-201ENST00000415580 579 ntBASIC17.3■□□□□ 0.36
GFRA3O60609 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GFRA3O60609 FAM58DP-201ENST00000428076 619 ntBASIC17.3■□□□□ 0.36
GFRA3O60609 AL671277.1-201ENST00000429656 993 ntBASIC17.3■□□□□ 0.36
GFRA3O60609 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.3■□□□□ 0.36
GFRA3O60609 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.3■□□□□ 0.36
GFRA3O60609 RBPMS2P1-201ENST00000437762 623 ntBASIC17.3■□□□□ 0.36
GFRA3O60609 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.3■□□□□ 0.36
GFRA3O60609 CXCL1P1-201ENST00000502804 216 ntBASIC17.3■□□□□ 0.36
GFRA3O60609 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.3■□□□□ 0.36
GFRA3O60609 AC069120.2-201ENST00000524091 540 ntBASIC17.3■□□□□ 0.36
GFRA3O60609 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GFRA3O60609 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.3■□□□□ 0.36
GFRA3O60609 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.3■□□□□ 0.36
GFRA3O60609 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFRA3O60609 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFRA3O60609 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFRA3O60609 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFRA3O60609 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.3■□□□□ 0.36
GFRA3O60609 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.3■□□□□ 0.36
GFRA3O60609 AL353593.2-201ENST00000602529 1483 ntBASIC17.3■□□□□ 0.36
GFRA3O60609 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.3■□□□□ 0.36
GFRA3O60609 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.29■□□□□ 0.36
GFRA3O60609 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.29■□□□□ 0.36
GFRA3O60609 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.29■□□□□ 0.36
GFRA3O60609 AC097493.3-201ENST00000509725 367 ntBASIC17.29■□□□□ 0.36
GFRA3O60609 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.29■□□□□ 0.36
GFRA3O60609 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.29■□□□□ 0.36
GFRA3O60609 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.29■□□□□ 0.36
GFRA3O60609 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.29■□□□□ 0.36
GFRA3O60609 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.29■□□□□ 0.36
GFRA3O60609 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.29■□□□□ 0.36
GFRA3O60609 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.29■□□□□ 0.36
GFRA3O60609 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.29■□□□□ 0.36
GFRA3O60609 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
GFRA3O60609 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFRA3O60609 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GFRA3O60609 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.28■□□□□ 0.36
GFRA3O60609 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.28■□□□□ 0.36
GFRA3O60609 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
GFRA3O60609 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GFRA3O60609 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GFRA3O60609 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GFRA3O60609 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.28■□□□□ 0.36
GFRA3O60609 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GFRA3O60609 GIMAP3P-201ENST00000495150 836 ntBASIC17.28■□□□□ 0.36
GFRA3O60609 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GFRA3O60609 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.28■□□□□ 0.36
GFRA3O60609 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GFRA3O60609 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.28■□□□□ 0.36
GFRA3O60609 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GFRA3O60609 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GFRA3O60609 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GFRA3O60609 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GFRA3O60609 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
GFRA3O60609 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
GFRA3O60609 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GFRA3O60609 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GFRA3O60609 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.27■□□□□ 0.36
GFRA3O60609 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GFRA3O60609 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.27■□□□□ 0.36
GFRA3O60609 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
GFRA3O60609 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms