Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 MTMR9LP-203ENST00000426597 1545 ntBASIC17.78■□□□□ 0.44
PCDHGA12O60330 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 PMS2P7-201ENST00000506558 1336 ntBASIC17.78■□□□□ 0.44
PCDHGA12O60330 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.78■□□□□ 0.44
PCDHGA12O60330 TP73-AS1-210ENST00000637775 1455 ntBASIC17.78■□□□□ 0.44
PCDHGA12O60330 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGA12O60330 RCN1P2-201ENST00000398357 915 ntBASIC17.78■□□□□ 0.44
PCDHGA12O60330 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGA12O60330 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGA12O60330 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGA12O60330 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGA12O60330 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGA12O60330 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA12O60330 AC112777.1-201ENST00000540175 1423 ntBASIC17.78■□□□□ 0.44
PCDHGA12O60330 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA12O60330 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGA12O60330 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA12O60330 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA12O60330 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA12O60330 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA12O60330 WIZP1-201ENST00000531444 2299 ntBASIC17.77■□□□□ 0.44
PCDHGA12O60330 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA12O60330 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGA12O60330 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGA12O60330 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA12O60330 RPS2P28-201ENST00000314255 741 ntBASIC17.77■□□□□ 0.44
PCDHGA12O60330 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA12O60330 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA12O60330 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA12O60330 FGFR3P6-201ENST00000457012 610 ntBASIC17.77■□□□□ 0.44
PCDHGA12O60330 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGA12O60330 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDHGA12O60330 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGA12O60330 AC009533.2-201ENST00000543664 586 ntBASIC17.77■□□□□ 0.44
PCDHGA12O60330 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA12O60330 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDHGA12O60330 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PCDHGA12O60330 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA12O60330 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHGA12O60330 MIR7706-201ENST00000613747 67 ntBASIC17.77■□□□□ 0.44
PCDHGA12O60330 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA12O60330 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA12O60330 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA12O60330 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA12O60330 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA12O60330 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA12O60330 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA12O60330 AC090164.3-201ENST00000610780 2143 ntBASIC17.77■□□□□ 0.43
PCDHGA12O60330 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 AC068472.1-201ENST00000474589 881 ntBASIC17.76■□□□□ 0.43
PCDHGA12O60330 RPL13AP23-201ENST00000480739 586 ntBASIC17.76■□□□□ 0.43
PCDHGA12O60330 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 AC005336.2-201ENST00000593183 939 ntBASIC17.76■□□□□ 0.43
PCDHGA12O60330 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 FAM215A-202ENST00000632077 792 ntBASIC17.76■□□□□ 0.43
PCDHGA12O60330 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA12O60330 ZNF259P1-201ENST00000407656 1365 ntBASIC17.76■□□□□ 0.43
PCDHGA12O60330 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGA12O60330 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA12O60330 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms