Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.16■□□□□ 0.34
LCMT2O60294 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 AC068880.1-201ENST00000507289 2297 ntBASIC17.16■□□□□ 0.34
LCMT2O60294 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
LCMT2O60294 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.16■□□□□ 0.34
LCMT2O60294 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.16■□□□□ 0.34
LCMT2O60294 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.16■□□□□ 0.34
LCMT2O60294 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.16■□□□□ 0.34
LCMT2O60294 MIR3180-1-201ENST00000580374 94 ntBASIC17.16■□□□□ 0.34
LCMT2O60294 MIR3180-3-201ENST00000584616 94 ntBASIC17.16■□□□□ 0.34
LCMT2O60294 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.16■□□□□ 0.34
LCMT2O60294 AC093458.2-201ENST00000623150 629 ntBASIC17.16■□□□□ 0.34
LCMT2O60294 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
LCMT2O60294 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 KRT18P1-202ENST00000452408 1331 ntBASIC17.16■□□□□ 0.34
LCMT2O60294 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.16■□□□□ 0.34
LCMT2O60294 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.16■□□□□ 0.34
LCMT2O60294 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCMT2O60294 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
LCMT2O60294 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 NOC2LP2-201ENST00000407594 1944 ntBASIC17.15■□□□□ 0.34
LCMT2O60294 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LCMT2O60294 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LCMT2O60294 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.15■□□□□ 0.34
LCMT2O60294 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.15■□□□□ 0.34
LCMT2O60294 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.15■□□□□ 0.34
LCMT2O60294 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.15■□□□□ 0.34
LCMT2O60294 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.15■□□□□ 0.34
LCMT2O60294 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 AC091607.1-201ENST00000490318 1060 ntBASIC17.15■□□□□ 0.34
LCMT2O60294 AP002414.4-201ENST00000589764 1148 ntBASIC17.15■□□□□ 0.34
LCMT2O60294 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LCMT2O60294 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
LCMT2O60294 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.15■□□□□ 0.34
LCMT2O60294 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.15■□□□□ 0.34
LCMT2O60294 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCMT2O60294 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.15■□□□□ 0.34
LCMT2O60294 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.15■□□□□ 0.34
LCMT2O60294 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.14■□□□□ 0.33
LCMT2O60294 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
LCMT2O60294 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LCMT2O60294 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.14■□□□□ 0.33
LCMT2O60294 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LCMT2O60294 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LCMT2O60294 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.14■□□□□ 0.33
LCMT2O60294 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
LCMT2O60294 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.14■□□□□ 0.33
LCMT2O60294 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.14■□□□□ 0.33
LCMT2O60294 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.14■□□□□ 0.33
LCMT2O60294 AL353801.3-201ENST00000609898 542 ntBASIC17.14■□□□□ 0.33
LCMT2O60294 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
LCMT2O60294 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LCMT2O60294 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LCMT2O60294 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms