Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.67□□□□□ -0.06
SSSCA1O60232 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.67□□□□□ -0.06
SSSCA1O60232 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.67□□□□□ -0.06
SSSCA1O60232 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.67□□□□□ -0.06
SSSCA1O60232 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.67□□□□□ -0.06
SSSCA1O60232 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SSSCA1O60232 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.67□□□□□ -0.06
SSSCA1O60232 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.67□□□□□ -0.06
SSSCA1O60232 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SSSCA1O60232 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.67□□□□□ -0.06
SSSCA1O60232 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SSSCA1O60232 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SSSCA1O60232 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SSSCA1O60232 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.66□□□□□ -0.06
SSSCA1O60232 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.66□□□□□ -0.06
SSSCA1O60232 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.66□□□□□ -0.06
SSSCA1O60232 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.66□□□□□ -0.06
SSSCA1O60232 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.66□□□□□ -0.06
SSSCA1O60232 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 MIR149-201ENST00000384879 89 ntBASIC14.66□□□□□ -0.06
SSSCA1O60232 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.66□□□□□ -0.06
SSSCA1O60232 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.66□□□□□ -0.06
SSSCA1O60232 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.66□□□□□ -0.06
SSSCA1O60232 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.66□□□□□ -0.06
SSSCA1O60232 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.66□□□□□ -0.06
SSSCA1O60232 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.66□□□□□ -0.06
SSSCA1O60232 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.66□□□□□ -0.06
SSSCA1O60232 MTDHP1-201ENST00000605323 784 ntBASIC14.66□□□□□ -0.06
SSSCA1O60232 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.66□□□□□ -0.06
SSSCA1O60232 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SSSCA1O60232 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.66□□□□□ -0.06
SSSCA1O60232 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.66□□□□□ -0.06
SSSCA1O60232 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSSCA1O60232 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.65□□□□□ -0.06
SSSCA1O60232 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.65□□□□□ -0.06
SSSCA1O60232 AC133963.1-201ENST00000504166 1679 ntBASIC14.65□□□□□ -0.06
SSSCA1O60232 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.65□□□□□ -0.06
SSSCA1O60232 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.65□□□□□ -0.06
SSSCA1O60232 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.65□□□□□ -0.06
SSSCA1O60232 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SSSCA1O60232 KRASP1-201ENST00000407852 552 ntBASIC14.65□□□□□ -0.06
SSSCA1O60232 AC239809.2-201ENST00000415381 517 ntBASIC14.65□□□□□ -0.06
SSSCA1O60232 NIFKP9-201ENST00000419265 221 ntBASIC14.65□□□□□ -0.06
SSSCA1O60232 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SSSCA1O60232 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.65□□□□□ -0.06
SSSCA1O60232 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.65□□□□□ -0.06
SSSCA1O60232 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.65□□□□□ -0.06
SSSCA1O60232 AC011298.2-201ENST00000617989 482 ntBASIC14.65□□□□□ -0.06
SSSCA1O60232 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.65□□□□□ -0.06
SSSCA1O60232 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
SSSCA1O60232 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
SSSCA1O60232 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.65□□□□□ -0.06
SSSCA1O60232 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
SSSCA1O60232 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.65□□□□□ -0.06
SSSCA1O60232 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSSCA1O60232 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.65□□□□□ -0.06
SSSCA1O60232 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.65□□□□□ -0.06
SSSCA1O60232 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
SSSCA1O60232 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.64□□□□□ -0.07
SSSCA1O60232 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms