Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.46■□□□□ 0.71
EXTL3O43909 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EXTL3O43909 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EXTL3O43909 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EXTL3O43909 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EXTL3O43909 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
EXTL3O43909 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.46■□□□□ 0.71
EXTL3O43909 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
EXTL3O43909 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.46■□□□□ 0.71
EXTL3O43909 AP005901.3-202ENST00000581653 237 ntBASIC19.46■□□□□ 0.71
EXTL3O43909 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.46■□□□□ 0.71
EXTL3O43909 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.46■□□□□ 0.71
EXTL3O43909 AC008764.6-201ENST00000595909 2069 ntBASIC19.46■□□□□ 0.71
EXTL3O43909 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
EXTL3O43909 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EXTL3O43909 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.46■□□□□ 0.71
EXTL3O43909 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.46■□□□□ 0.71
EXTL3O43909 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.46■□□□□ 0.71
EXTL3O43909 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.45■□□□□ 0.7
EXTL3O43909 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
EXTL3O43909 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.45■□□□□ 0.7
EXTL3O43909 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.45■□□□□ 0.7
EXTL3O43909 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.45■□□□□ 0.7
EXTL3O43909 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.45■□□□□ 0.7
EXTL3O43909 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.45■□□□□ 0.7
EXTL3O43909 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.45■□□□□ 0.7
EXTL3O43909 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.45■□□□□ 0.7
EXTL3O43909 AC005336.2-201ENST00000593183 939 ntBASIC19.45■□□□□ 0.7
EXTL3O43909 Z69720.1-201ENST00000601483 472 ntBASIC19.45■□□□□ 0.7
EXTL3O43909 AC116407.2-201ENST00000613639 860 ntBASIC19.45■□□□□ 0.7
EXTL3O43909 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.45■□□□□ 0.7
EXTL3O43909 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
EXTL3O43909 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
EXTL3O43909 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
EXTL3O43909 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
EXTL3O43909 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
EXTL3O43909 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
EXTL3O43909 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXTL3O43909 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
EXTL3O43909 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.44■□□□□ 0.7
EXTL3O43909 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.44■□□□□ 0.7
EXTL3O43909 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
EXTL3O43909 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.44■□□□□ 0.7
EXTL3O43909 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.44■□□□□ 0.7
EXTL3O43909 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.44■□□□□ 0.7
EXTL3O43909 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
EXTL3O43909 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.44■□□□□ 0.7
EXTL3O43909 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.44■□□□□ 0.7
EXTL3O43909 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
EXTL3O43909 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.44■□□□□ 0.7
EXTL3O43909 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
EXTL3O43909 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.44■□□□□ 0.7
EXTL3O43909 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.44■□□□□ 0.7
EXTL3O43909 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.44■□□□□ 0.7
EXTL3O43909 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXTL3O43909 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
EXTL3O43909 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EXTL3O43909 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.43■□□□□ 0.7
EXTL3O43909 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.43■□□□□ 0.7
EXTL3O43909 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EXTL3O43909 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EXTL3O43909 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EXTL3O43909 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EXTL3O43909 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EXTL3O43909 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
EXTL3O43909 KRT17P6-201ENST00000453795 1220 ntBASIC19.43■□□□□ 0.7
EXTL3O43909 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.43■□□□□ 0.7
EXTL3O43909 AP000867.3-201ENST00000524675 377 ntBASIC19.43■□□□□ 0.7
EXTL3O43909 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.43■□□□□ 0.7
EXTL3O43909 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.43■□□□□ 0.7
EXTL3O43909 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
EXTL3O43909 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms