Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DUX1O43812 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX1O43812 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX1O43812 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
DUX1O43812 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
DUX1O43812 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX1O43812 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.15■□□□□ 0.34
DUX1O43812 SART3-203ENST00000546611 1184 ntBASIC17.15■□□□□ 0.34
DUX1O43812 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DUX1O43812 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.15■□□□□ 0.34
DUX1O43812 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
DUX1O43812 MIR7706-201ENST00000613747 67 ntBASIC17.15■□□□□ 0.34
DUX1O43812 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.15■□□□□ 0.34
DUX1O43812 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
DUX1O43812 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DUX1O43812 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.15■□□□□ 0.34
DUX1O43812 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.15■□□□□ 0.34
DUX1O43812 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX1O43812 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.15■□□□□ 0.34
DUX1O43812 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX1O43812 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX1O43812 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX1O43812 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
DUX1O43812 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
DUX1O43812 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
DUX1O43812 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DUX1O43812 KRT8P47-201ENST00000604727 1398 ntBASIC17.15■□□□□ 0.34
DUX1O43812 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX1O43812 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
DUX1O43812 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
DUX1O43812 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
DUX1O43812 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
DUX1O43812 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.34
DUX1O43812 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX1O43812 WIZP1-201ENST00000531444 2299 ntBASIC17.14■□□□□ 0.33
DUX1O43812 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX1O43812 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.14■□□□□ 0.33
DUX1O43812 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
DUX1O43812 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX1O43812 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.14■□□□□ 0.33
DUX1O43812 AC122714.2-201ENST00000502787 707 ntBASIC17.14■□□□□ 0.33
DUX1O43812 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.14■□□□□ 0.33
DUX1O43812 AC021087.4-201ENST00000563761 564 ntBASIC17.14■□□□□ 0.33
DUX1O43812 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.14■□□□□ 0.33
DUX1O43812 AC139887.3-201ENST00000568585 713 ntBASIC17.14■□□□□ 0.33
DUX1O43812 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
DUX1O43812 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.14■□□□□ 0.33
DUX1O43812 FAM215A-202ENST00000632077 792 ntBASIC17.14■□□□□ 0.33
DUX1O43812 AF228730.7-201ENST00000641842 219 ntBASIC17.14■□□□□ 0.33
DUX1O43812 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX1O43812 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
DUX1O43812 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.14■□□□□ 0.33
DUX1O43812 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
DUX1O43812 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
DUX1O43812 BX323043.1-201ENST00000641006 1765 ntBASIC17.14■□□□□ 0.33
DUX1O43812 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
DUX1O43812 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX1O43812 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX1O43812 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX1O43812 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
DUX1O43812 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX1O43812 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.14■□□□□ 0.33
DUX1O43812 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
DUX1O43812 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
DUX1O43812 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.13■□□□□ 0.33
DUX1O43812 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
DUX1O43812 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.13■□□□□ 0.33
DUX1O43812 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.13■□□□□ 0.33
DUX1O43812 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 PMS2P1-201ENST00000431037 1228 ntBASIC17.13■□□□□ 0.33
DUX1O43812 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.13■□□□□ 0.33
DUX1O43812 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.13■□□□□ 0.33
DUX1O43812 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.13■□□□□ 0.33
DUX1O43812 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
DUX1O43812 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.13■□□□□ 0.33
DUX1O43812 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.13■□□□□ 0.33
DUX1O43812 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.13■□□□□ 0.33
DUX1O43812 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.13■□□□□ 0.33
DUX1O43812 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
DUX1O43812 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
DUX1O43812 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms