Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN5O00501 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.91■□□□□ 0.62
CLDN5O00501 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.91■□□□□ 0.62
CLDN5O00501 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.91■□□□□ 0.62
CLDN5O00501 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.91■□□□□ 0.62
CLDN5O00501 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.91■□□□□ 0.62
CLDN5O00501 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDN5O00501 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDN5O00501 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN5O00501 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN5O00501 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN5O00501 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN5O00501 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN5O00501 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN5O00501 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CLDN5O00501 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CLDN5O00501 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLDN5O00501 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN5O00501 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN5O00501 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN5O00501 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN5O00501 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN5O00501 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 RN7SL510P-201ENST00000581311 263 ntBASIC18.9■□□□□ 0.62
CLDN5O00501 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.9■□□□□ 0.62
CLDN5O00501 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLDN5O00501 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN5O00501 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN5O00501 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN5O00501 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN5O00501 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN5O00501 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN5O00501 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CLDN5O00501 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLDN5O00501 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLDN5O00501 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLDN5O00501 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLDN5O00501 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.89■□□□□ 0.62
CLDN5O00501 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.89■□□□□ 0.62
CLDN5O00501 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN5O00501 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN5O00501 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN5O00501 AC138028.4-201ENST00000564984 1845 ntBASIC18.89■□□□□ 0.61
CLDN5O00501 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN5O00501 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLDN5O00501 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN5O00501 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN5O00501 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN5O00501 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN5O00501 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
CLDN5O00501 POM121L3P-201ENST00000419331 1163 ntBASIC18.89■□□□□ 0.61
CLDN5O00501 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.89■□□□□ 0.61
CLDN5O00501 KRT16P4-201ENST00000453883 522 ntBASIC18.89■□□□□ 0.61
CLDN5O00501 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.89■□□□□ 0.61
CLDN5O00501 EMBP1-201ENST00000458200 901 ntBASIC18.89■□□□□ 0.61
CLDN5O00501 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.89■□□□□ 0.61
CLDN5O00501 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN5O00501 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.89■□□□□ 0.61
CLDN5O00501 AC111152.3-201ENST00000569699 673 ntBASIC18.89■□□□□ 0.61
CLDN5O00501 MIR5100-201ENST00000579544 119 ntBASIC18.89■□□□□ 0.61
CLDN5O00501 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN5O00501 AC114341.1-201ENST00000618070 349 ntBASIC18.89■□□□□ 0.61
CLDN5O00501 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN5O00501 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN5O00501 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CLDN5O00501 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN5O00501 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLDN5O00501 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLDN5O00501 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN5O00501 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN5O00501 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN5O00501 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLDN5O00501 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLDN5O00501 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN5O00501 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLDN5O00501 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN5O00501 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CLDN5O00501 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN5O00501 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN5O00501 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN5O00501 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms