Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NFKBIEO00221 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NFKBIEO00221 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.53■■□□□ 1.04
NFKBIEO00221 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NFKBIEO00221 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.52■■□□□ 1.04
NFKBIEO00221 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.52■■□□□ 1.04
NFKBIEO00221 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.52■■□□□ 1.04
NFKBIEO00221 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
NFKBIEO00221 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NFKBIEO00221 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
NFKBIEO00221 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.52■■□□□ 1.04
NFKBIEO00221 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.52■■□□□ 1.04
NFKBIEO00221 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NFKBIEO00221 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.52■■□□□ 1.04
NFKBIEO00221 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.52■■□□□ 1.04
NFKBIEO00221 ADH5P3-201ENST00000433842 1137 ntBASIC21.52■■□□□ 1.04
NFKBIEO00221 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.52■■□□□ 1.04
NFKBIEO00221 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.52■■□□□ 1.04
NFKBIEO00221 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.52■■□□□ 1.04
NFKBIEO00221 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.52■■□□□ 1.04
NFKBIEO00221 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.52■■□□□ 1.04
NFKBIEO00221 AC015911.4-201ENST00000588022 1070 ntBASIC21.52■■□□□ 1.04
NFKBIEO00221 AC007064.4-201ENST00000637740 555 ntBASIC21.52■■□□□ 1.04
NFKBIEO00221 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.52■■□□□ 1.04
NFKBIEO00221 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
NFKBIEO00221 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NFKBIEO00221 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.52■■□□□ 1.03
NFKBIEO00221 AC063926.2-201ENST00000623766 1308 ntBASIC21.52■■□□□ 1.03
NFKBIEO00221 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
NFKBIEO00221 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NFKBIEO00221 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.52■■□□□ 1.03
NFKBIEO00221 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NFKBIEO00221 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.51■■□□□ 1.03
NFKBIEO00221 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.51■■□□□ 1.03
NFKBIEO00221 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NFKBIEO00221 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NFKBIEO00221 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NFKBIEO00221 AP002414.1-201ENST00000391405 1147 ntBASIC21.51■■□□□ 1.03
NFKBIEO00221 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.51■■□□□ 1.03
NFKBIEO00221 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NFKBIEO00221 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.51■■□□□ 1.03
NFKBIEO00221 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
NFKBIEO00221 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.51■■□□□ 1.03
NFKBIEO00221 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.51■■□□□ 1.03
NFKBIEO00221 AC068137.2-201ENST00000605408 478 ntBASIC21.51■■□□□ 1.03
NFKBIEO00221 AC012645.4-201ENST00000610691 1061 ntBASIC21.51■■□□□ 1.03
NFKBIEO00221 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NFKBIEO00221 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NFKBIEO00221 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NFKBIEO00221 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.51■■□□□ 1.03
NFKBIEO00221 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NFKBIEO00221 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NFKBIEO00221 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NFKBIEO00221 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NFKBIEO00221 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NFKBIEO00221 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NFKBIEO00221 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NFKBIEO00221 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.5■■□□□ 1.03
NFKBIEO00221 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.5■■□□□ 1.03
NFKBIEO00221 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
NFKBIEO00221 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NFKBIEO00221 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.5■■□□□ 1.03
NFKBIEO00221 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NFKBIEO00221 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NFKBIEO00221 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NFKBIEO00221 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.5■■□□□ 1.03
NFKBIEO00221 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NFKBIEO00221 AC003669.1-201ENST00000334569 611 ntBASIC21.5■■□□□ 1.03
NFKBIEO00221 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NFKBIEO00221 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NFKBIEO00221 PMS2P4-201ENST00000412466 1052 ntBASIC21.5■■□□□ 1.03
NFKBIEO00221 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.5■■□□□ 1.03
NFKBIEO00221 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.5■■□□□ 1.03
NFKBIEO00221 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.5■■□□□ 1.03
NFKBIEO00221 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.5■■□□□ 1.03
NFKBIEO00221 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NFKBIEO00221 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
NFKBIEO00221 AC092919.2-201ENST00000623631 1645 ntBASIC21.5■■□□□ 1.03
NFKBIEO00221 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
NFKBIEO00221 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NFKBIEO00221 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.5■■□□□ 1.03
NFKBIEO00221 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.49■■□□□ 1.03
NFKBIEO00221 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NFKBIEO00221 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NFKBIEO00221 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NFKBIEO00221 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.49■■□□□ 1.03
NFKBIEO00221 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
NFKBIEO00221 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NFKBIEO00221 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.49■■□□□ 1.03
NFKBIEO00221 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.49■■□□□ 1.03
NFKBIEO00221 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NFKBIEO00221 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NFKBIEO00221 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NFKBIEO00221 MIR661-201ENST00000384842 89 ntBASIC21.49■■□□□ 1.03
NFKBIEO00221 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NFKBIEO00221 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
NFKBIEO00221 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NFKBIEO00221 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NFKBIEO00221 AC093214.1-201ENST00000511688 1107 ntBASIC21.49■■□□□ 1.03
NFKBIEO00221 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms