Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 AC105917.1-201ENST00000506637 2539 ntBASIC12.66□□□□□ -0.38
LINC01546A6NGU7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 KRT8P7-201ENST00000533003 1432 ntBASIC12.66□□□□□ -0.38
LINC01546A6NGU7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 AC004951.3-201ENST00000418645 1148 ntBASIC12.66□□□□□ -0.38
LINC01546A6NGU7 POM121L13P-201ENST00000422362 380 ntBASIC12.66□□□□□ -0.38
LINC01546A6NGU7 KRT18P5-201ENST00000436075 1291 ntBASIC12.66□□□□□ -0.38
LINC01546A6NGU7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.66□□□□□ -0.38
LINC01546A6NGU7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC01546A6NGU7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 AC009065.1-201ENST00000564055 1225 ntBASIC12.65□□□□□ -0.38
LINC01546A6NGU7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01546A6NGU7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
LINC01546A6NGU7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.65□□□□□ -0.39
LINC01546A6NGU7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
LINC01546A6NGU7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC01546A6NGU7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
LINC01546A6NGU7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms