Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SBNO1A3KN83 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SBNO1A3KN83 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SBNO1A3KN83 COX5BP2-201ENST00000392354 334 ntBASIC24.16■■□□□ 1.46
SBNO1A3KN83 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 METTL23-205ENST00000588302 925 ntTSL 5 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 AC011467.4-201ENST00000594891 528 ntBASIC24.16■■□□□ 1.46
SBNO1A3KN83 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 AC010654.1-201ENST00000615722 808 ntBASIC24.16■■□□□ 1.46
SBNO1A3KN83 AL805961.1-202ENST00000641562 540 ntBASIC24.16■■□□□ 1.46
SBNO1A3KN83 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SBNO1A3KN83 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SBNO1A3KN83 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SBNO1A3KN83 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SBNO1A3KN83 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 AP000344.2-201ENST00000512987 629 ntBASIC24.15■■□□□ 1.46
SBNO1A3KN83 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC24.15■■□□□ 1.46
SBNO1A3KN83 AC004790.2-201ENST00000623588 572 ntBASIC24.15■■□□□ 1.46
SBNO1A3KN83 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SBNO1A3KN83 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
SBNO1A3KN83 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
SBNO1A3KN83 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SBNO1A3KN83 GMCL1P1-201ENST00000463439 1581 ntBASIC24.14■■□□□ 1.46
SBNO1A3KN83 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
SBNO1A3KN83 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
SBNO1A3KN83 AC132938.5-201ENST00000624980 1813 ntBASIC24.14■■□□□ 1.45
SBNO1A3KN83 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SBNO1A3KN83 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SBNO1A3KN83 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SBNO1A3KN83 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
SBNO1A3KN83 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC24.14■■□□□ 1.45
SBNO1A3KN83 RNF34-208ENST00000555076 593 ntTSL 3 BASIC24.14■■□□□ 1.45
SBNO1A3KN83 AC010507.1-201ENST00000633895 436 ntBASIC24.14■■□□□ 1.45
SBNO1A3KN83 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SBNO1A3KN83 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SBNO1A3KN83 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.13■■□□□ 1.45
SBNO1A3KN83 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SBNO1A3KN83 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SBNO1A3KN83 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SBNO1A3KN83 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SBNO1A3KN83 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC24.13■■□□□ 1.45
SBNO1A3KN83 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SBNO1A3KN83 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC24.13■■□□□ 1.45
SBNO1A3KN83 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SBNO1A3KN83 ATP6V0CP3-201ENST00000417255 467 ntBASIC24.13■■□□□ 1.45
SBNO1A3KN83 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC24.13■■□□□ 1.45
SBNO1A3KN83 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC24.13■■□□□ 1.45
SBNO1A3KN83 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SBNO1A3KN83 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
SBNO1A3KN83 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SBNO1A3KN83 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SBNO1A3KN83 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC24.13■■□□□ 1.45
SBNO1A3KN83 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
SBNO1A3KN83 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
SBNO1A3KN83 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SBNO1A3KN83 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
SBNO1A3KN83 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
SBNO1A3KN83 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SBNO1A3KN83 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
SBNO1A3KN83 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SBNO1A3KN83 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
SBNO1A3KN83 STOM-202ENST00000347359 870 ntTSL 2 BASIC24.12■■□□□ 1.45
SBNO1A3KN83 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC24.12■■□□□ 1.45
SBNO1A3KN83 GID4-202ENST00000376345 1391 ntTSL 3 BASIC24.12■■□□□ 1.45
SBNO1A3KN83 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SBNO1A3KN83 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC24.12■■□□□ 1.45
SBNO1A3KN83 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SBNO1A3KN83 TSEN15P1-201ENST00000423257 515 ntBASIC24.12■■□□□ 1.45
SBNO1A3KN83 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SBNO1A3KN83 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SBNO1A3KN83 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SBNO1A3KN83 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
SBNO1A3KN83 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC24.12■■□□□ 1.45
SBNO1A3KN83 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC24.12■■□□□ 1.45
SBNO1A3KN83 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SBNO1A3KN83 AC093028.1-201ENST00000622998 982 ntBASIC24.12■■□□□ 1.45
SBNO1A3KN83 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
SBNO1A3KN83 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SBNO1A3KN83 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SBNO1A3KN83 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SBNO1A3KN83 ESPNP-201ENST00000270691 2015 ntBASIC24.11■■□□□ 1.45
SBNO1A3KN83 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms