Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
TRAV30A0A087WSZ9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRAV30A0A087WSZ9 AC022898.2-201ENST00000616822 1312 ntBASIC14.15□□□□□ -0.15
TRAV30A0A087WSZ9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 AL390955.1-201ENST00000428694 934 ntBASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 NAPSB-206ENST00000562112 1266 ntBASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 NEK4P2-201ENST00000580004 1012 ntBASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 AC092865.7-201ENST00000641832 219 ntBASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
TRAV30A0A087WSZ9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 SNORA78-201ENST00000459373 127 ntBASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 DUTP2-201ENST00000519164 463 ntBASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV30A0A087WSZ9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 AC084018.2-201ENST00000613093 2607 ntBASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 AC067852.2-201ENST00000590513 2313 ntBASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV30A0A087WSZ9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms