Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 ESPNP-201ENST00000270691 2015 ntBASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 YBX1P5-201ENST00000509441 847 ntBASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 AL589182.2-201ENST00000619332 1049 ntBASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCFC2Q9Y5Z7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 AC002310.6-201ENST00000624451 1377 ntBASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 METTL21AP1-201ENST00000438852 635 ntBASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 ALG1L5P-201ENST00000482043 771 ntBASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 AC004706.3-202ENST00000621574 984 ntBASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 AC073592.5-201ENST00000624854 528 ntBASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.69■□□□□ 0.58
HCFC2Q9Y5Z7 KRT8P47-201ENST00000604727 1398 ntBASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 ELK2BP-201ENST00000415014 1224 ntBASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 AC103564.2-201ENST00000432853 1299 ntBASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 MIR4469-201ENST00000583919 79 ntBASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC2Q9Y5Z7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 CRYGEP-201ENST00000412192 528 ntBASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 SNHG9-202ENST00000564014 471 ntBASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 AC092865.6-201ENST00000642101 219 ntBASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HCFC2Q9Y5Z7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.66■□□□□ 0.58
HCFC2Q9Y5Z7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms