Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 AC067930.6-201ENST00000623257 4947 ntBASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 MIR4466-201ENST00000606121 54 ntBASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRAPPC1Q9Y5R8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 MYLKP1-201ENST00000509077 1580 ntBASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 AL354811.1-201ENST00000610286 706 ntBASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 AC133963.1-201ENST00000504166 1679 ntBASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 AC022188.1-201ENST00000620960 1664 ntBASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAPPC1Q9Y5R8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 GMCL1P1-201ENST00000463439 1581 ntBASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 KRT18P68-201ENST00000392293 1000 ntBASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
TRAPPC1Q9Y5R8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms