Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 AC138028.4-201ENST00000564984 1845 ntBASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB3Q9Y5E6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 MIR662-201ENST00000384847 95 ntBASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 TSSC2-201ENST00000450217 709 ntBASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 AC012313.1-201ENST00000593393 3059 ntBASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 AC139713.2-201ENST00000641328 2723 ntBASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHB3Q9Y5E6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 AC009065.1-201ENST00000564055 1225 ntBASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 NPAP1P7-201ENST00000613027 823 ntBASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 AC012313.10-201ENST00000623509 926 ntBASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCDHB3Q9Y5E6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms