Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 RPS15P9-201ENST00000494093 319 ntBASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTCBQ9Y3I0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 FAM8A3P-201ENST00000427218 844 ntBASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 AC004790.2-201ENST00000623588 572 ntBASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 NCF1C-201ENST00000438382 1427 ntBASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RTCBQ9Y3I0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 AC106028.4-201ENST00000614509 607 ntBASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 AL353593.2-201ENST00000602529 1483 ntBASIC22.53■■□□□ 1.2
RTCBQ9Y3I0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTCBQ9Y3I0 AC005332.7-201ENST00000614046 2005 ntBASIC22.52■■□□□ 1.19
RTCBQ9Y3I0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 SIRPAP1-201ENST00000448467 1770 ntBASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 AC148477.5-201ENST00000625164 1645 ntBASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 MIR770-201ENST00000390219 98 ntBASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 ESPNP-201ENST00000270691 2015 ntBASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTCBQ9Y3I0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 AC132938.5-201ENST00000624980 1813 ntBASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC22.5■■□□□ 1.19
RTCBQ9Y3I0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms