Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC26.52■■□□□ 1.84
SHANK2Q9UPX8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
SHANK2Q9UPX8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SHANK2Q9UPX8 AC018445.3-201ENST00000624177 1945 ntBASIC26.52■■□□□ 1.84
SHANK2Q9UPX8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC26.52■■□□□ 1.84
SHANK2Q9UPX8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SHANK2Q9UPX8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SHANK2Q9UPX8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SHANK2Q9UPX8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SHANK2Q9UPX8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SHANK2Q9UPX8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC26.52■■□□□ 1.84
SHANK2Q9UPX8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.84
SHANK2Q9UPX8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC26.51■■□□□ 1.84
SHANK2Q9UPX8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 AC134684.3-201ENST00000641758 218 ntBASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 AC079781.4-201ENST00000641908 219 ntBASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 WIZP1-201ENST00000531444 2299 ntBASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 BX276092.7-203ENST00000637198 1536 ntBASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 AC006504.4-201ENST00000592118 1568 ntBASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 BX323043.1-201ENST00000641006 1765 ntBASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 PC-208ENST00000529047 1607 ntTSL 3 BASIC26.51■■□□□ 1.83
SHANK2Q9UPX8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 AC002558.1-201ENST00000488906 803 ntBASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 AC112482.1-201ENST00000492080 688 ntBASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 AC005593.1-201ENST00000624894 515 ntBASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHANK2Q9UPX8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 DNAJB3-201ENST00000446806 729 ntBASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC26.49■■□□□ 1.83
SHANK2Q9UPX8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 AC009949.1-201ENST00000623048 1830 ntBASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 AC009336.1-201ENST00000608941 1553 ntBASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms