Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 AC008556.1-201ENST00000610908 2040 ntBASIC16.98■□□□□ 0.31
LHX6Q9UPM6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 TSEN15P1-201ENST00000423257 515 ntBASIC16.98■□□□□ 0.31
LHX6Q9UPM6 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 AC025062.2-201ENST00000605477 670 ntBASIC16.98■□□□□ 0.31
LHX6Q9UPM6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LHX6Q9UPM6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 Z82202.1-201ENST00000623446 1880 ntBASIC16.97■□□□□ 0.31
LHX6Q9UPM6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 AL512353.2-201ENST00000448759 1962 ntBASIC16.97■□□□□ 0.31
LHX6Q9UPM6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 RN7SL371P-201ENST00000578099 267 ntBASIC16.97■□□□□ 0.31
LHX6Q9UPM6 C20orf181-201ENST00000623918 480 ntBASIC16.97■□□□□ 0.31
LHX6Q9UPM6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 AL356309.3-201ENST00000624132 1934 ntBASIC16.97■□□□□ 0.31
LHX6Q9UPM6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.97■□□□□ 0.31
LHX6Q9UPM6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 HOXB1-202ENST00000577092 1414 ntBASIC16.96■□□□□ 0.31
LHX6Q9UPM6 AP005117.1-201ENST00000584346 1413 ntBASIC16.96■□□□□ 0.31
LHX6Q9UPM6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.96■□□□□ 0.31
LHX6Q9UPM6 AL035696.2-201ENST00000407941 709 ntBASIC16.96■□□□□ 0.31
LHX6Q9UPM6 AC022494.1-201ENST00000466044 728 ntBASIC16.96■□□□□ 0.31
LHX6Q9UPM6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 AC005225.4-201ENST00000557330 545 ntBASIC16.96■□□□□ 0.31
LHX6Q9UPM6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 AC027612.4-201ENST00000605371 583 ntBASIC16.96■□□□□ 0.31
LHX6Q9UPM6 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 AC002310.6-201ENST00000624451 1377 ntBASIC16.96■□□□□ 0.31
LHX6Q9UPM6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.96■□□□□ 0.31
LHX6Q9UPM6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms