Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 EMBP1-201ENST00000458200 901 ntBASIC18.95■□□□□ 0.62
CDH9Q9ULB4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 AC007967.3-201ENST00000434308 558 ntBASIC18.94■□□□□ 0.62
CDH9Q9ULB4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH9Q9ULB4 ABALON-201ENST00000629058 1903 ntBASIC18.94■□□□□ 0.62
CDH9Q9ULB4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 FAM220CP-201ENST00000395253 831 ntBASIC18.93■□□□□ 0.62
CDH9Q9ULB4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 AC116407.2-201ENST00000613639 860 ntBASIC18.93■□□□□ 0.62
CDH9Q9ULB4 REXO1L6P-202ENST00000619970 1078 ntBASIC18.93■□□□□ 0.62
CDH9Q9ULB4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 AP000997.3-201ENST00000623333 2250 ntBASIC18.93■□□□□ 0.62
CDH9Q9ULB4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH9Q9ULB4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms