Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SALL4Q9UJQ4 AC073508.3-201ENST00000619697 1419 ntBASIC19.08■□□□□ 0.65
SALL4Q9UJQ4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SALL4Q9UJQ4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SALL4Q9UJQ4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SALL4Q9UJQ4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.08■□□□□ 0.65
SALL4Q9UJQ4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SALL4Q9UJQ4 REXO1L11P-201ENST00000620964 1927 ntBASIC19.08■□□□□ 0.65
SALL4Q9UJQ4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SALL4Q9UJQ4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.08■□□□□ 0.65
SALL4Q9UJQ4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SALL4Q9UJQ4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SALL4Q9UJQ4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.08■□□□□ 0.65
SALL4Q9UJQ4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 EGLN1P1-201ENST00000531623 762 ntBASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 AC009065.1-201ENST00000564055 1225 ntBASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.08■□□□□ 0.64
SALL4Q9UJQ4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 ARMC10P1-201ENST00000313754 855 ntBASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 AC024243.1-201ENST00000609234 778 ntBASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 AC116562.4-202ENST00000641738 218 ntBASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SALL4Q9UJQ4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 TSPY14P-201ENST00000303979 915 ntBASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SALL4Q9UJQ4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms