Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FBXO40Q9UH90 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 COX5BP2-201ENST00000392354 334 ntBASIC20.34■□□□□ 0.85
FBXO40Q9UH90 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 AC098831.1-202ENST00000438821 336 ntBASIC20.34■□□□□ 0.85
FBXO40Q9UH90 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 AC012640.2-201ENST00000561606 901 ntBASIC20.34■□□□□ 0.85
FBXO40Q9UH90 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 AC098818.2-201ENST00000564925 2320 ntBASIC20.34■□□□□ 0.85
FBXO40Q9UH90 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 AC104109.2-201ENST00000602919 1418 ntBASIC20.34■□□□□ 0.85
FBXO40Q9UH90 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.34■□□□□ 0.85
FBXO40Q9UH90 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 AC027601.4-201ENST00000611259 610 ntBASIC20.33■□□□□ 0.85
FBXO40Q9UH90 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
FBXO40Q9UH90 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FBXO40Q9UH90 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
FBXO40Q9UH90 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 AC018445.3-201ENST00000624177 1945 ntBASIC20.32■□□□□ 0.84
FBXO40Q9UH90 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 PRYP5-201ENST00000451909 266 ntBASIC20.32■□□□□ 0.84
FBXO40Q9UH90 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 SIGLEC16-201ENST00000599858 1437 ntBASIC20.32■□□□□ 0.84
FBXO40Q9UH90 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.32■□□□□ 0.84
FBXO40Q9UH90 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 MIR940-201ENST00000401276 94 ntBASIC20.31■□□□□ 0.84
FBXO40Q9UH90 AL591424.1-201ENST00000442569 1213 ntBASIC20.31■□□□□ 0.84
FBXO40Q9UH90 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 Z83851.2-201ENST00000609564 659 ntBASIC20.31■□□□□ 0.84
FBXO40Q9UH90 FAM197Y3-203ENST00000618346 717 ntBASIC20.31■□□□□ 0.84
FBXO40Q9UH90 AC139530.3-201ENST00000620344 690 ntBASIC20.31■□□□□ 0.84
FBXO40Q9UH90 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms