Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 MESTP1-201ENST00000404287 994 ntBASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 AL353807.1-201ENST00000427475 662 ntBASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 LINC02199-201ENST00000506655 2702 ntBASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTLC3Q9NUV7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 GPAT2P1-201ENST00000444924 1672 ntBASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 AL023284.2-201ENST00000405850 579 ntBASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPTLC3Q9NUV7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 MIR564-202ENST00000385049 94 ntBASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 MIR4651-201ENST00000582622 73 ntBASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 AC073195.1-201ENST00000607241 877 ntBASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPTLC3Q9NUV7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 RPPH1-201ENST00000516869 333 ntBASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SPTLC3Q9NUV7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPTLC3Q9NUV7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPTLC3Q9NUV7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms