Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.96■□□□□ 0.79
BLOC1S4Q9NUP1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.95■□□□□ 0.79
BLOC1S4Q9NUP1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 AL358472.4-201ENST00000633140 710 ntBASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BLOC1S4Q9NUP1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 AC026471.1-201ENST00000564629 3026 ntBASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 GUSBP12-201ENST00000513727 720 ntBASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 AC124864.1-201ENST00000623408 392 ntBASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 IER3-202ENST00000376377 1350 ntBASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 REXO1L11P-201ENST00000620964 1927 ntBASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.94■□□□□ 0.78
BLOC1S4Q9NUP1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms