Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.99■□□□□ 0.63
TLR9Q9NR96 AC023274.1-201ENST00000418278 595 ntBASIC18.99■□□□□ 0.63
TLR9Q9NR96 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.99■□□□□ 0.63
TLR9Q9NR96 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.99■□□□□ 0.63
TLR9Q9NR96 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.99■□□□□ 0.63
TLR9Q9NR96 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
TLR9Q9NR96 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.99■□□□□ 0.63
TLR9Q9NR96 AC006557.2-201ENST00000592985 1240 ntBASIC18.99■□□□□ 0.63
TLR9Q9NR96 AC005593.1-201ENST00000624894 515 ntBASIC18.99■□□□□ 0.63
TLR9Q9NR96 PGM5P2-202ENST00000637225 1043 ntBASIC18.99■□□□□ 0.63
TLR9Q9NR96 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TLR9Q9NR96 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
TLR9Q9NR96 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TLR9Q9NR96 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TLR9Q9NR96 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TLR9Q9NR96 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TLR9Q9NR96 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TLR9Q9NR96 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TLR9Q9NR96 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TLR9Q9NR96 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.98■□□□□ 0.63
TLR9Q9NR96 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 MTDHP5-201ENST00000598980 586 ntBASIC18.98■□□□□ 0.63
TLR9Q9NR96 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TLR9Q9NR96 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TLR9Q9NR96 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TLR9Q9NR96 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TLR9Q9NR96 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TLR9Q9NR96 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.98■□□□□ 0.63
TLR9Q9NR96 PMPCAP1-201ENST00000508114 1576 ntBASIC18.98■□□□□ 0.63
TLR9Q9NR96 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TLR9Q9NR96 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TLR9Q9NR96 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TLR9Q9NR96 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TLR9Q9NR96 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TLR9Q9NR96 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TLR9Q9NR96 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 KRT18P27-201ENST00000427733 1299 ntBASIC18.97■□□□□ 0.63
TLR9Q9NR96 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TLR9Q9NR96 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TLR9Q9NR96 AC064836.3-201ENST00000607928 673 ntBASIC18.97■□□□□ 0.63
TLR9Q9NR96 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TLR9Q9NR96 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TLR9Q9NR96 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.97■□□□□ 0.63
TLR9Q9NR96 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.96■□□□□ 0.63
TLR9Q9NR96 TNXA-203ENST00000507684 2038 ntBASIC18.96■□□□□ 0.63
TLR9Q9NR96 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TLR9Q9NR96 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TLR9Q9NR96 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.96■□□□□ 0.63
TLR9Q9NR96 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TLR9Q9NR96 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.96■□□□□ 0.63
TLR9Q9NR96 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TLR9Q9NR96 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TLR9Q9NR96 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TLR9Q9NR96 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TLR9Q9NR96 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.96■□□□□ 0.63
TLR9Q9NR96 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.96■□□□□ 0.63
TLR9Q9NR96 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.96■□□□□ 0.63
TLR9Q9NR96 DNAJB3-202ENST00000449667 1266 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms