Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIPK3Q9H422 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
HIPK3Q9H422 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIPK3Q9H422 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIPK3Q9H422 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HIPK3Q9H422 SPDYE21P-201ENST00000413323 827 ntBASIC19.56■□□□□ 0.72
HIPK3Q9H422 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIPK3Q9H422 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.56■□□□□ 0.72
HIPK3Q9H422 ALG1L5P-201ENST00000482043 771 ntBASIC19.56■□□□□ 0.72
HIPK3Q9H422 AC122714.2-201ENST00000502787 707 ntBASIC19.56■□□□□ 0.72
HIPK3Q9H422 RFPL4AP1-201ENST00000530883 850 ntBASIC19.56■□□□□ 0.72
HIPK3Q9H422 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.56■□□□□ 0.72
HIPK3Q9H422 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.56■□□□□ 0.72
HIPK3Q9H422 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIPK3Q9H422 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HIPK3Q9H422 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.56■□□□□ 0.72
HIPK3Q9H422 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIPK3Q9H422 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIPK3Q9H422 SIGLEC16-201ENST00000599858 1437 ntBASIC19.56■□□□□ 0.72
HIPK3Q9H422 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIPK3Q9H422 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.56■□□□□ 0.72
HIPK3Q9H422 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
HIPK3Q9H422 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIPK3Q9H422 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HIPK3Q9H422 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HIPK3Q9H422 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HIPK3Q9H422 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.55■□□□□ 0.72
HIPK3Q9H422 AC254562.1-201ENST00000417586 456 ntBASIC19.55■□□□□ 0.72
HIPK3Q9H422 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.55■□□□□ 0.72
HIPK3Q9H422 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.55■□□□□ 0.72
HIPK3Q9H422 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.55■□□□□ 0.72
HIPK3Q9H422 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.55■□□□□ 0.72
HIPK3Q9H422 MIR3197-201ENST00000582241 73 ntBASIC19.55■□□□□ 0.72
HIPK3Q9H422 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HIPK3Q9H422 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIPK3Q9H422 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 AC005082.1-201ENST00000413042 2259 ntBASIC19.54■□□□□ 0.72
HIPK3Q9H422 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 AC010460.3-201ENST00000511359 1579 ntBASIC19.54■□□□□ 0.72
HIPK3Q9H422 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 CRYGEP-201ENST00000412192 528 ntBASIC19.54■□□□□ 0.72
HIPK3Q9H422 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 AC096633.1-201ENST00000422446 749 ntBASIC19.54■□□□□ 0.72
HIPK3Q9H422 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 AL589182.2-201ENST00000619332 1049 ntBASIC19.54■□□□□ 0.72
HIPK3Q9H422 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIPK3Q9H422 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.54■□□□□ 0.72
HIPK3Q9H422 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIPK3Q9H422 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HIPK3Q9H422 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIPK3Q9H422 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIPK3Q9H422 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HIPK3Q9H422 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIPK3Q9H422 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HIPK3Q9H422 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms