Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 AC108860.2-201ENST00000562760 2183 ntBASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 AC009053.2-201ENST00000563701 2365 ntBASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 OR6D1P-203ENST00000641209 4860 ntBASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 MIR1238-201ENST00000408483 83 ntBASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 TSPY7P-201ENST00000431358 1114 ntBASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 NEK4P2-201ENST00000580004 1012 ntBASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR2J3Q9H1A7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 PP12613-201ENST00000424958 2230 ntBASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR2J3Q9H1A7 AC141586.5-201ENST00000624546 2050 ntBASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 AL390955.1-201ENST00000428694 934 ntBASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 AC022898.2-201ENST00000616822 1312 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms