Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 AL353593.2-201ENST00000602529 1483 ntBASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RTFDC1Q9BY42 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RTFDC1Q9BY42 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 ALG1L5P-201ENST00000482043 771 ntBASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 AL596442.2-201ENST00000610240 980 ntBASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 CROCCP3-202ENST00000420820 1947 ntBASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 AC006504.4-201ENST00000592118 1568 ntBASIC21.7■■□□□ 1.06
RTFDC1Q9BY42 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 ELK2BP-201ENST00000415014 1224 ntBASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 AC254562.1-201ENST00000417586 456 ntBASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 AL020989.1-201ENST00000422979 469 ntBASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 HCG4B-203ENST00000450128 991 ntBASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 MIR4469-201ENST00000583919 79 ntBASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTFDC1Q9BY42 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 AC126763.1-201ENST00000552015 2118 ntBASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 VN2R19P-201ENST00000442399 1052 ntBASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 C20orf181-201ENST00000623918 480 ntBASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 ESPNP-201ENST00000270691 2015 ntBASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTFDC1Q9BY42 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 CRYGEP-201ENST00000412192 528 ntBASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 METTL21AP1-201ENST00000438852 635 ntBASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 PRSS29P-201ENST00000440800 595 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms