Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 MTCL1P1-201ENST00000446207 792 ntBASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 AC112698.1-201ENST00000510299 916 ntBASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 AC093458.2-201ENST00000623150 629 ntBASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 KRT18P1-202ENST00000452408 1331 ntBASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCM2Q9BSQ5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCM2Q9BSQ5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 DRAXINP1-201ENST00000437611 948 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms