Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV9Q99603 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.03□□□□□ -0.16
TRGV9Q99603 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV9Q99603 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.03□□□□□ -0.16
TRGV9Q99603 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRGV9Q99603 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV9Q99603 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV9Q99603 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.03□□□□□ -0.16
TRGV9Q99603 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TRGV9Q99603 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.03□□□□□ -0.16
TRGV9Q99603 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.03□□□□□ -0.16
TRGV9Q99603 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRGV9Q99603 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV9Q99603 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV9Q99603 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV9Q99603 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV9Q99603 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRGV9Q99603 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRGV9Q99603 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV9Q99603 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.03□□□□□ -0.16
TRGV9Q99603 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV9Q99603 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV9Q99603 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.02□□□□□ -0.16
TRGV9Q99603 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRGV9Q99603 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRGV9Q99603 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV9Q99603 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV9Q99603 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV9Q99603 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRGV9Q99603 AC100803.2-201ENST00000562459 1963 ntBASIC14.02□□□□□ -0.16
TRGV9Q99603 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV9Q99603 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRGV9Q99603 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRGV9Q99603 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.02□□□□□ -0.16
TRGV9Q99603 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV9Q99603 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV9Q99603 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV9Q99603 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV9Q99603 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRGV9Q99603 TSPY14P-201ENST00000303979 915 ntBASIC14.02□□□□□ -0.17
TRGV9Q99603 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.02□□□□□ -0.17
TRGV9Q99603 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TRGV9Q99603 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV9Q99603 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.02□□□□□ -0.17
TRGV9Q99603 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.02□□□□□ -0.17
TRGV9Q99603 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.02□□□□□ -0.17
TRGV9Q99603 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV9Q99603 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV9Q99603 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.02□□□□□ -0.17
TRGV9Q99603 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV9Q99603 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRGV9Q99603 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV9Q99603 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV9Q99603 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV9Q99603 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV9Q99603 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
TRGV9Q99603 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV9Q99603 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV9Q99603 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
TRGV9Q99603 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV9Q99603 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV9Q99603 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV9Q99603 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRGV9Q99603 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV9Q99603 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV9Q99603 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRGV9Q99603 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.01□□□□□ -0.17
TRGV9Q99603 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV9Q99603 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV9Q99603 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV9Q99603 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
TRGV9Q99603 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.01□□□□□ -0.17
TRGV9Q99603 MIR1238-201ENST00000408483 83 ntBASIC14.01□□□□□ -0.17
TRGV9Q99603 AC128688.1-201ENST00000487626 519 ntBASIC14.01□□□□□ -0.17
TRGV9Q99603 EGLN1P1-201ENST00000531623 762 ntBASIC14.01□□□□□ -0.17
TRGV9Q99603 AL512604.3-201ENST00000569583 964 ntBASIC14.01□□□□□ -0.17
TRGV9Q99603 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.01□□□□□ -0.17
TRGV9Q99603 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV9Q99603 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV9Q99603 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV9Q99603 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV9Q99603 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV9Q99603 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV9Q99603 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
TRGV9Q99603 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRGV9Q99603 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
TRGV9Q99603 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV9Q99603 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV9Q99603 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV9Q99603 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRGV9Q99603 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV9Q99603 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.01□□□□□ -0.17
TRGV9Q99603 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV9Q99603 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV9Q99603 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRGV9Q99603 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRGV9Q99603 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV9Q99603 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14□□□□□ -0.17
TRGV9Q99603 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRGV9Q99603 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms