Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF2Q99496 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF2Q99496 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF2Q99496 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.35□□□□□ -0.11
RNF2Q99496 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RNF2Q99496 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF2Q99496 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF2Q99496 RBM17P1-201ENST00000453646 1190 ntBASIC14.35□□□□□ -0.11
RNF2Q99496 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF2Q99496 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RNF2Q99496 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF2Q99496 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF2Q99496 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF2Q99496 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF2Q99496 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF2Q99496 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RNF2Q99496 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF2Q99496 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
RNF2Q99496 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF2Q99496 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RNF2Q99496 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RNF2Q99496 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RNF2Q99496 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF2Q99496 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF2Q99496 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
RNF2Q99496 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF2Q99496 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF2Q99496 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RNF2Q99496 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF2Q99496 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RNF2Q99496 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF2Q99496 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RNF2Q99496 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
RNF2Q99496 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF2Q99496 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF2Q99496 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF2Q99496 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF2Q99496 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF2Q99496 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF2Q99496 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
RNF2Q99496 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
RNF2Q99496 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF2Q99496 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.33□□□□□ -0.11
RNF2Q99496 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.33□□□□□ -0.11
RNF2Q99496 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.33□□□□□ -0.11
RNF2Q99496 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF2Q99496 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF2Q99496 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RNF2Q99496 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF2Q99496 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RNF2Q99496 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF2Q99496 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF2Q99496 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RNF2Q99496 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF2Q99496 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF2Q99496 AL355075.4-201ENST00000554988 638 ntBASIC14.33□□□□□ -0.12
RNF2Q99496 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF2Q99496 AP000525.1-201ENST00000608286 694 ntBASIC14.33□□□□□ -0.12
RNF2Q99496 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF2Q99496 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF2Q99496 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms