Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.28■■□□□ 1
NEK1Q96PY6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.28■■□□□ 1
NEK1Q96PY6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NEK1Q96PY6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 TSPY12P-201ENST00000421279 868 ntBASIC21.28■■□□□ 1
NEK1Q96PY6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.28■■□□□ 1
NEK1Q96PY6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.28■■□□□ 1
NEK1Q96PY6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.28■■□□□ 1
NEK1Q96PY6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NEK1Q96PY6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
NEK1Q96PY6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.28■■□□□ 1
NEK1Q96PY6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.28■■□□□ 1
NEK1Q96PY6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
NEK1Q96PY6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.28■■□□□ 1
NEK1Q96PY6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEK1Q96PY6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.27■■□□□ 1
NEK1Q96PY6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NEK1Q96PY6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NEK1Q96PY6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NEK1Q96PY6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.27■■□□□ 1
NEK1Q96PY6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NEK1Q96PY6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
NEK1Q96PY6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.27■■□□□ 1
NEK1Q96PY6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NEK1Q96PY6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.27■■□□□ 1
NEK1Q96PY6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.27■■□□□ 1
NEK1Q96PY6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.27■■□□□ 1
NEK1Q96PY6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NEK1Q96PY6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.27■■□□□ 1
NEK1Q96PY6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.27■■□□□ 1
NEK1Q96PY6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.27■■□□□ 1
NEK1Q96PY6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NEK1Q96PY6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.27■■□□□ 1
NEK1Q96PY6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.27■■□□□ 1
NEK1Q96PY6 AL390719.2-201ENST00000606993 987 ntBASIC21.27■■□□□ 1
NEK1Q96PY6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.27■■□□□ 1
NEK1Q96PY6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
NEK1Q96PY6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
NEK1Q96PY6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NEK1Q96PY6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
NEK1Q96PY6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NEK1Q96PY6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.27■□□□□ 0.99
NEK1Q96PY6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NEK1Q96PY6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NEK1Q96PY6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NEK1Q96PY6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
NEK1Q96PY6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.26■□□□□ 0.99
NEK1Q96PY6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.26■□□□□ 0.99
NEK1Q96PY6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NEK1Q96PY6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NEK1Q96PY6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.26■□□□□ 0.99
NEK1Q96PY6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.26■□□□□ 0.99
NEK1Q96PY6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NEK1Q96PY6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
NEK1Q96PY6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NEK1Q96PY6 LINC00896-202ENST00000609602 2128 ntBASIC21.26■□□□□ 0.99
NEK1Q96PY6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NEK1Q96PY6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NEK1Q96PY6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NEK1Q96PY6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.26■□□□□ 0.99
NEK1Q96PY6 Z83836.1-201ENST00000624605 1642 ntBASIC21.26■□□□□ 0.99
NEK1Q96PY6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.25■□□□□ 0.99
NEK1Q96PY6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NEK1Q96PY6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NEK1Q96PY6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NEK1Q96PY6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.25■□□□□ 0.99
NEK1Q96PY6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
NEK1Q96PY6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.25■□□□□ 0.99
NEK1Q96PY6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NEK1Q96PY6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NEK1Q96PY6 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.25■□□□□ 0.99
NEK1Q96PY6 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.25■□□□□ 0.99
NEK1Q96PY6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
NEK1Q96PY6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NEK1Q96PY6 LETM1P2-201ENST00000597330 2178 ntBASIC21.25■□□□□ 0.99
NEK1Q96PY6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.25■□□□□ 0.99
NEK1Q96PY6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NEK1Q96PY6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NEK1Q96PY6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NEK1Q96PY6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.25■□□□□ 0.99
NEK1Q96PY6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NEK1Q96PY6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
NEK1Q96PY6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NEK1Q96PY6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
NEK1Q96PY6 KRT8P47-201ENST00000604727 1398 ntBASIC21.24■□□□□ 0.99
NEK1Q96PY6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms