Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 AL031133.1-201ENST00000406807 723 ntBASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 NTF6B-201ENST00000591913 560 ntBASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 AC026471.1-201ENST00000564629 3026 ntBASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 AL136038.3-201ENST00000561909 1096 ntBASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.52■□□□□ 0.56
CSPG4P5Q96PW8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CSPG4P5Q96PW8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CSPG4P5Q96PW8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSPG4P5Q96PW8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSPG4P5Q96PW8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSPG4P5Q96PW8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CSPG4P5Q96PW8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSPG4P5Q96PW8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CSPG4P5Q96PW8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 LINC00896-202ENST00000609602 2128 ntBASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSPG4P5Q96PW8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.5■□□□□ 0.55
CSPG4P5Q96PW8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CSPG4P5Q96PW8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CSPG4P5Q96PW8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSPG4P5Q96PW8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CSPG4P5Q96PW8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
CSPG4P5Q96PW8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSPG4P5Q96PW8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CSPG4P5Q96PW8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSPG4P5Q96PW8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.5■□□□□ 0.55
CSPG4P5Q96PW8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms