Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 AC107918.4-202ENST00000641623 219 ntBASIC20.28■□□□□ 0.84
FGD4Q96M96 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FGD4Q96M96 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FGD4Q96M96 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FGD4Q96M96 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FGD4Q96M96 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.28■□□□□ 0.84
FGD4Q96M96 PHGDH-209ENST00000641074 1780 ntBASIC20.28■□□□□ 0.84
FGD4Q96M96 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FGD4Q96M96 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FGD4Q96M96 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FGD4Q96M96 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
FGD4Q96M96 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
FGD4Q96M96 PMPCAP1-201ENST00000508114 1576 ntBASIC20.27■□□□□ 0.84
FGD4Q96M96 AP002414.3-201ENST00000589352 1468 ntBASIC20.27■□□□□ 0.84
FGD4Q96M96 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FGD4Q96M96 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FGD4Q96M96 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FGD4Q96M96 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.27■□□□□ 0.84
FGD4Q96M96 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.27■□□□□ 0.84
FGD4Q96M96 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.27■□□□□ 0.84
FGD4Q96M96 RNA5SP415-201ENST00000517246 115 ntBASIC20.27■□□□□ 0.84
FGD4Q96M96 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
FGD4Q96M96 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.27■□□□□ 0.84
FGD4Q96M96 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.27■□□□□ 0.84
FGD4Q96M96 AC140113.2-201ENST00000604370 208 ntBASIC20.27■□□□□ 0.84
FGD4Q96M96 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.27■□□□□ 0.84
FGD4Q96M96 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FGD4Q96M96 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.27■□□□□ 0.84
FGD4Q96M96 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FGD4Q96M96 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FGD4Q96M96 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
FGD4Q96M96 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FGD4Q96M96 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FGD4Q96M96 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
FGD4Q96M96 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FGD4Q96M96 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.26■□□□□ 0.83
FGD4Q96M96 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
FGD4Q96M96 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FGD4Q96M96 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FGD4Q96M96 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.26■□□□□ 0.83
FGD4Q96M96 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FGD4Q96M96 BX842568.4-201ENST00000421222 227 ntBASIC20.26■□□□□ 0.83
FGD4Q96M96 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.26■□□□□ 0.83
FGD4Q96M96 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.26■□□□□ 0.83
FGD4Q96M96 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.26■□□□□ 0.83
FGD4Q96M96 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.26■□□□□ 0.83
FGD4Q96M96 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.26■□□□□ 0.83
FGD4Q96M96 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
FGD4Q96M96 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
FGD4Q96M96 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FGD4Q96M96 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
FGD4Q96M96 AC079776.2-201ENST00000641154 1609 ntBASIC20.26■□□□□ 0.83
FGD4Q96M96 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.26■□□□□ 0.83
FGD4Q96M96 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
FGD4Q96M96 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FGD4Q96M96 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FGD4Q96M96 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
FGD4Q96M96 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.25■□□□□ 0.83
FGD4Q96M96 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
FGD4Q96M96 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
FGD4Q96M96 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 BX005266.1-201ENST00000473402 457 ntBASIC20.25■□□□□ 0.83
FGD4Q96M96 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.25■□□□□ 0.83
FGD4Q96M96 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 Z83851.2-201ENST00000609564 659 ntBASIC20.25■□□□□ 0.83
FGD4Q96M96 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.25■□□□□ 0.83
FGD4Q96M96 AD001527.2-201ENST00000622994 785 ntBASIC20.25■□□□□ 0.83
FGD4Q96M96 AC073592.4-201ENST00000623827 446 ntBASIC20.25■□□□□ 0.83
FGD4Q96M96 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
FGD4Q96M96 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.25■□□□□ 0.83
FGD4Q96M96 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
FGD4Q96M96 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.25■□□□□ 0.83
FGD4Q96M96 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
FGD4Q96M96 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.25■□□□□ 0.83
FGD4Q96M96 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
FGD4Q96M96 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
FGD4Q96M96 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
FGD4Q96M96 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FGD4Q96M96 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FGD4Q96M96 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FGD4Q96M96 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.24■□□□□ 0.83
FGD4Q96M96 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
FGD4Q96M96 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.24■□□□□ 0.83
FGD4Q96M96 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.24■□□□□ 0.83
FGD4Q96M96 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms