Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MIR3917-201ENST00000580971 93 ntBASIC19.02■□□□□ 0.64
CALR3Q96L12 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.02■□□□□ 0.64
CALR3Q96L12 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.02■□□□□ 0.64
CALR3Q96L12 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CALR3Q96L12 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CALR3Q96L12 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.02■□□□□ 0.64
CALR3Q96L12 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CALR3Q96L12 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CALR3Q96L12 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CALR3Q96L12 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
CALR3Q96L12 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.01■□□□□ 0.63
CALR3Q96L12 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.01■□□□□ 0.63
CALR3Q96L12 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
CALR3Q96L12 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CALR3Q96L12 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.01■□□□□ 0.63
CALR3Q96L12 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.01■□□□□ 0.63
CALR3Q96L12 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.01■□□□□ 0.63
CALR3Q96L12 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CALR3Q96L12 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.01■□□□□ 0.63
CALR3Q96L12 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CALR3Q96L12 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CALR3Q96L12 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19■□□□□ 0.63
CALR3Q96L12 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CALR3Q96L12 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19■□□□□ 0.63
CALR3Q96L12 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CALR3Q96L12 AL513477.1-201ENST00000602865 2407 ntBASIC19■□□□□ 0.63
CALR3Q96L12 AC099343.3-201ENST00000605834 2503 ntBASIC19■□□□□ 0.63
CALR3Q96L12 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19■□□□□ 0.63
CALR3Q96L12 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19■□□□□ 0.63
CALR3Q96L12 AC008550.1-201ENST00000511500 884 ntBASIC19■□□□□ 0.63
CALR3Q96L12 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19■□□□□ 0.63
CALR3Q96L12 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19■□□□□ 0.63
CALR3Q96L12 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19■□□□□ 0.63
CALR3Q96L12 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19■□□□□ 0.63
CALR3Q96L12 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19■□□□□ 0.63
CALR3Q96L12 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CALR3Q96L12 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CALR3Q96L12 LINC00167-201ENST00000530583 1419 ntBASIC19■□□□□ 0.63
CALR3Q96L12 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19■□□□□ 0.63
CALR3Q96L12 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CALR3Q96L12 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
CALR3Q96L12 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.99■□□□□ 0.63
CALR3Q96L12 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.99■□□□□ 0.63
CALR3Q96L12 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
CALR3Q96L12 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CALR3Q96L12 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CALR3Q96L12 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.99■□□□□ 0.63
CALR3Q96L12 MIR1238-201ENST00000408483 83 ntBASIC18.99■□□□□ 0.63
CALR3Q96L12 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.99■□□□□ 0.63
CALR3Q96L12 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CALR3Q96L12 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.99■□□□□ 0.63
CALR3Q96L12 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CALR3Q96L12 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CALR3Q96L12 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CALR3Q96L12 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CALR3Q96L12 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
CALR3Q96L12 HLA-J-201ENST00000462773 1622 ntBASIC18.99■□□□□ 0.63
CALR3Q96L12 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CALR3Q96L12 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CALR3Q96L12 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CALR3Q96L12 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.99■□□□□ 0.63
CALR3Q96L12 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CALR3Q96L12 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CALR3Q96L12 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms