Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LRCH3Q96II8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH3Q96II8 AL357033.4-201ENST00000617703 1807 ntBASIC19.39■□□□□ 0.69
LRCH3Q96II8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH3Q96II8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LRCH3Q96II8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH3Q96II8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH3Q96II8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH3Q96II8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH3Q96II8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.39■□□□□ 0.69
LRCH3Q96II8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.39■□□□□ 0.69
LRCH3Q96II8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH3Q96II8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH3Q96II8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH3Q96II8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH3Q96II8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH3Q96II8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH3Q96II8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH3Q96II8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH3Q96II8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH3Q96II8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH3Q96II8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH3Q96II8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 AC084346.2-201ENST00000607097 949 ntBASIC19.38■□□□□ 0.69
LRCH3Q96II8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH3Q96II8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.38■□□□□ 0.69
LRCH3Q96II8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH3Q96II8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH3Q96II8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH3Q96II8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH3Q96II8 AC004817.3-201ENST00000602957 2129 ntBASIC19.37■□□□□ 0.69
LRCH3Q96II8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH3Q96II8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH3Q96II8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH3Q96II8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH3Q96II8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH3Q96II8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 MTCL1P1-201ENST00000446207 792 ntBASIC19.37■□□□□ 0.69
LRCH3Q96II8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH3Q96II8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH3Q96II8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.37■□□□□ 0.69
LRCH3Q96II8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LRCH3Q96II8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.36■□□□□ 0.69
LRCH3Q96II8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
LRCH3Q96II8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRCH3Q96II8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 AP002414.1-201ENST00000391405 1147 ntBASIC19.36■□□□□ 0.69
LRCH3Q96II8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.36■□□□□ 0.69
LRCH3Q96II8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.36■□□□□ 0.69
LRCH3Q96II8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 AC108073.2-201ENST00000464002 357 ntBASIC19.36■□□□□ 0.69
LRCH3Q96II8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.36■□□□□ 0.69
LRCH3Q96II8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH3Q96II8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.36■□□□□ 0.69
LRCH3Q96II8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.36■□□□□ 0.69
LRCH3Q96II8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRCH3Q96II8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
LRCH3Q96II8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRCH3Q96II8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRCH3Q96II8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms