Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 AC239800.4-201ENST00000603712 296 ntBASIC17.85■□□□□ 0.45
CLDN23Q96B33 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 AC132938.5-201ENST00000624980 1813 ntBASIC17.85■□□□□ 0.45
CLDN23Q96B33 AL805961.1-202ENST00000641562 540 ntBASIC17.85■□□□□ 0.45
CLDN23Q96B33 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 AL049757.1-201ENST00000616842 1596 ntBASIC17.84■□□□□ 0.45
CLDN23Q96B33 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 RHOQP3-201ENST00000437982 621 ntBASIC17.84■□□□□ 0.45
CLDN23Q96B33 KRT19P2-202ENST00000557173 1012 ntBASIC17.84■□□□□ 0.45
CLDN23Q96B33 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN23Q96B33 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN23Q96B33 AC148477.5-201ENST00000625164 1645 ntBASIC17.83■□□□□ 0.45
CLDN23Q96B33 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
CLDN23Q96B33 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
CLDN23Q96B33 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN23Q96B33 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN23Q96B33 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN23Q96B33 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN23Q96B33 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
CLDN23Q96B33 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN23Q96B33 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN23Q96B33 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN23Q96B33 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN23Q96B33 MRPL20P1-201ENST00000400819 433 ntBASIC17.83■□□□□ 0.44
CLDN23Q96B33 BCRP1-201ENST00000444246 691 ntBASIC17.83■□□□□ 0.44
CLDN23Q96B33 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 SIGLEC30P-201ENST00000455569 941 ntBASIC17.83■□□□□ 0.44
CLDN23Q96B33 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN23Q96B33 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN23Q96B33 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 AC010507.1-201ENST00000633895 436 ntBASIC17.83■□□□□ 0.44
CLDN23Q96B33 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN23Q96B33 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN23Q96B33 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN23Q96B33 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN23Q96B33 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN23Q96B33 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN23Q96B33 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN23Q96B33 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms