Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.65■□□□□ 0.58
ATG4AQ8WYN0 NAPSB-206ENST00000562112 1266 ntBASIC18.65■□□□□ 0.58
ATG4AQ8WYN0 MIR4497-201ENST00000583208 89 ntBASIC18.65■□□□□ 0.58
ATG4AQ8WYN0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ATG4AQ8WYN0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATG4AQ8WYN0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
ATG4AQ8WYN0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATG4AQ8WYN0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.65■□□□□ 0.58
ATG4AQ8WYN0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATG4AQ8WYN0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATG4AQ8WYN0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ATG4AQ8WYN0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATG4AQ8WYN0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ATG4AQ8WYN0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATG4AQ8WYN0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATG4AQ8WYN0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ATG4AQ8WYN0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ATG4AQ8WYN0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 AC128688.1-201ENST00000487626 519 ntBASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 MIR3917-201ENST00000580971 93 ntBASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 AP006294.2-201ENST00000641667 209 ntBASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATG4AQ8WYN0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 SIRPAP1-201ENST00000448467 1770 ntBASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 AL157888.1-201ENST00000631930 593 ntBASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATG4AQ8WYN0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 LINC00602-201ENST00000629776 2065 ntBASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATG4AQ8WYN0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms