Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 AC132938.6-201ENST00000623828 1655 ntBASIC17.57■□□□□ 0.4
ATL1Q8WXF7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATL1Q8WXF7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 LINC00602-201ENST00000629776 2065 ntBASIC17.56■□□□□ 0.4
ATL1Q8WXF7 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.56■□□□□ 0.4
ATL1Q8WXF7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 HBZP1-201ENST00000354915 429 ntBASIC17.56■□□□□ 0.4
ATL1Q8WXF7 AC092597.1-201ENST00000487352 616 ntBASIC17.56■□□□□ 0.4
ATL1Q8WXF7 AC022616.7-201ENST00000525383 220 ntBASIC17.56■□□□□ 0.4
ATL1Q8WXF7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.56■□□□□ 0.4
ATL1Q8WXF7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATL1Q8WXF7 AC106820.2-201ENST00000563775 3264 ntBASIC17.55■□□□□ 0.4
ATL1Q8WXF7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 MIR662-201ENST00000384847 95 ntBASIC17.55■□□□□ 0.4
ATL1Q8WXF7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 KRT18P65-201ENST00000439811 1286 ntBASIC17.55■□□□□ 0.4
ATL1Q8WXF7 KRT18P38-201ENST00000449496 1282 ntBASIC17.55■□□□□ 0.4
ATL1Q8WXF7 DUX4L26-201ENST00000489078 1255 ntBASIC17.55■□□□□ 0.4
ATL1Q8WXF7 AP003733.1-201ENST00000491725 852 ntBASIC17.55■□□□□ 0.4
ATL1Q8WXF7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 LINC01311-201ENST00000565162 1445 ntBASIC17.55■□□□□ 0.4
ATL1Q8WXF7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.55■□□□□ 0.4
ATL1Q8WXF7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.54■□□□□ 0.4
ATL1Q8WXF7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
ATL1Q8WXF7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL1Q8WXF7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms