Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 AC009065.1-201ENST00000564055 1225 ntBASIC18.42■□□□□ 0.54
SCG3Q8WXD2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.42■□□□□ 0.54
SCG3Q8WXD2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SCG3Q8WXD2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.41■□□□□ 0.54
SCG3Q8WXD2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 AC005332.1-201ENST00000577698 1310 ntBASIC18.41■□□□□ 0.54
SCG3Q8WXD2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCG3Q8WXD2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 AC116407.4-201ENST00000623319 1061 ntBASIC18.4■□□□□ 0.54
SCG3Q8WXD2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG3Q8WXD2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
SCG3Q8WXD2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SCG3Q8WXD2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SCG3Q8WXD2 PCDHA12-202ENST00000613593 2588 ntBASIC18.39■□□□□ 0.54
SCG3Q8WXD2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SCG3Q8WXD2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SCG3Q8WXD2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SCG3Q8WXD2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.39■□□□□ 0.53
SCG3Q8WXD2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms