Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC005332.8-201ENST00000622750 2735 ntBASIC18.21■□□□□ 0.51
PTCD2Q8WV60 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 AL645929.1-201ENST00000420084 975 ntBASIC18.21■□□□□ 0.51
PTCD2Q8WV60 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.21■□□□□ 0.51
PTCD2Q8WV60 AC022898.2-201ENST00000616822 1312 ntBASIC18.21■□□□□ 0.51
PTCD2Q8WV60 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PTCD2Q8WV60 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PTCD2Q8WV60 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
PTCD2Q8WV60 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PTCD2Q8WV60 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 PCDHB18P-201ENST00000524813 2368 ntBASIC18.2■□□□□ 0.5
PTCD2Q8WV60 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 AC132938.6-201ENST00000623828 1655 ntBASIC18.2■□□□□ 0.5
PTCD2Q8WV60 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 AC006116.8-202ENST00000587620 1550 ntBASIC18.2■□□□□ 0.5
PTCD2Q8WV60 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCD2Q8WV60 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 RNF126P1-202ENST00000569893 925 ntBASIC18.19■□□□□ 0.5
PTCD2Q8WV60 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PTCD2Q8WV60 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCD2Q8WV60 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms