Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 AC008040.2-201ENST00000461049 708 ntBASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 AC110285.5-201ENST00000611501 352 ntBASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 GPAT2P1-201ENST00000444924 1672 ntBASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 AC133963.1-201ENST00000504166 1679 ntBASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.93■□□□□ 0.46
RAB3IL1Q8TBN0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 AL353807.1-201ENST00000427475 662 ntBASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 AC124016.1-201ENST00000609552 612 ntBASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB3IL1Q8TBN0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 AC026366.1-201ENST00000488803 879 ntBASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 AC233263.1-201ENST00000578059 224 ntBASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 AC066615.1-201ENST00000640911 628 ntBASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms